DNA barcodes for ecology, evolution, and conservation

WJ Kress, C García-Robledo, M Uriarte… - Trends in ecology & …, 2015 - cell.com
The use of DNA barcodes, which are short gene sequences taken from a standardized
portion of the genome and used to identify species, is entering a new phase of application …

Better the devil you know? Guidelines for insightful utilization of nrDNA ITS in species-level evolutionary studies in plants

GN Feliner, JA Rosselló - Molecular phylogenetics and evolution, 2007 - Elsevier
The internal transcribed spacers (ITS) of the nuclear ribosomal 18S–5.8 S–26S cistron
continue to be the most popular non-plastid region for species-level phylogenetic studies of …

DNA barcoding methods for land plants

AJ Fazekas, ML Kuzmina, SG Newmaster… - DNA barcodes: Methods …, 2012 - Springer
DNA barcoding in the land plants presents a number of challenges compared to DNA
barcoding in many animal clades. The CO1 animal DNA barcode is not effective for plants …

Extensive pyrosequencing reveals frequent intra-genomic variations of internal transcribed spacer regions of nuclear ribosomal DNA

J Song, L Shi, D Li, Y Sun, Y Niu, Z Chen, H Luo… - 2012 - journals.plos.org
Background Internal transcribed spacer of nuclear ribosomal DNA (nrDNA) is already one of
the most popular phylogenetic and DNA barcoding markers. However, the existence of its …

Transition-transversion bias is not universal: a counter example from grasshopper pseudogenes

I Keller, D Bensasson, RA Nichols - PLoS genetics, 2007 - journals.plos.org
Comparisons of the DNA sequences of metazoa show an excess of transitional over
transversional substitutions. Part of this bias is due to the relatively high rate of mutation of …

Phylogeny and generic limits in the sister tribes Psychotrieae and Palicoureeae (Rubiaceae): Evolution of schizocarps in Psychotria and origins of bacterial leaf …

SG Razafimandimbison, CM Taylor… - American Journal of …, 2014 - Wiley Online Library
• Premise of the study: The pantropical, species‐rich Psychotrieae and Palicoureeae are
sister tribes of mostly drupe‐bearing and nonbacterial leaf‐nodulating species with …

Molecular phylogeny and genome size evolution of the genus Betula (Betulaceae)

N Wang, HA McAllister, PR Bartlett… - Annals of …, 2016 - academic.oup.com
Abstract Background and Aims Betula L.(birch) is a genus of approx. 60 species, subspecies
or varieties with a wide distribution in the northern hemisphere, of ecological and economic …

Plastid and nuclear DNA polymorphism reveals historical processes of isolation and reticulation in the olive tree complex (Olea europaea)

G Besnard, R Rubio de Casas… - Journal of …, 2007 - Wiley Online Library
Aim The olive tree is considered one of the best indicators of the Mediterranean climate. The
species' distribution is associated with geographical and bioclimatic factors, as well as being …

A Review of Molecular Phylogenetic Studies of Rubiaceae1

B Bremer - Annals of the Missouri Botanical Garden, 2009 - BioOne
Rubiaceae is one of the five largest families of flowering plants with over 13,000 species. We
have seen a tremendous increase in our understanding of the phylogeny of the family …

Profiling of koumiss microbiota and organic acids and their effects on koumiss taste

H Tang, H Ma, Q Hou, W Li, H Xu, W Liu, Z Sun… - BMC microbiology, 2020 - Springer
Background Koumiss is a naturally fermented mare's milk. Over recent decades, numerous
studies have revealed the diversity of lactic acid bacteria in koumiss. However, there is …