Knowing the precise locations of nucleosomes in a genome is key to understanding how
genes are regulated. Recent'next generation'ChIP–chip and ChIP–Seq technologies have …

Complex transcriptional behaviours are encoded in the DNA sequences of gene regulatory
regions. Advances in our understanding of these behaviours have been recently gained …

In order to uncover the meanings of 'book of life', 155 different biological language models
(BLMs) for DNA, RNA and protein sequence analysis are discussed in this study, which are …

Sequence-based analysis and prediction are fundamental bioinformatic tasks that facilitate
understanding of the sequence (-structure)-function paradigm for DNAs, RNAs and proteins …

Sorghum bicolor is a drought tolerant C4 grass used for the production of grain, forage,
sugar, and lignocellulosic biomass and a genetic model for C4 grasses due to its relatively …

With the explosive growth of biological sequences generated in the post-genomic era, one
of the most challenging problems in bioinformatics and computational biology is to …

With the avalanche of biological sequences generated in the post-genomic age, one of the
most challenging problems in computational biology is how to effectively formulate the …

Due to the dominant position of deep learning (mostly deep neural networks) in various
artificial intelligence applications, recently, ensemble learning based on deep neural …

With the avalanche of biological sequences generated in the post-genomic age, one of the
most challenging problems is how to computationally analyze their structures and functions …

De novo mutation plays an important role in autism spectrum disorders (ASDs). Notably,
pathogenic copy number variants (CNVs) are characterized by high mutation rates. We …