Nonhomologous DNA end-joining for repair of DNA double-strand breaks

NR Pannunzio, G Watanabe, MR Lieber - Journal of Biological Chemistry, 2018 - ASBMB
Nonhomologous DNA end-joining (NHEJ) is the predominant double-strand break (DSB)
repair pathway throughout the cell cycle and accounts for nearly all DSB repair outside of …

Repair of double-strand breaks by end joining

KK Chiruvella, Z Liang… - Cold Spring Harbor …, 2013 - cshperspectives.cshlp.org
Nonhomologous end joining (NHEJ) refers to a set of genome maintenance pathways in
which two DNA double-strand break (DSB) ends are (re) joined by apposition, processing …

Eukaryotic base excision repair: new approaches shine light on mechanism

WA Beard, JK Horton, R Prasad… - Annual review of …, 2019 - annualreviews.org
Genomic DNA is susceptible to endogenous and environmental stresses that modify DNA
structure and its coding potential. Correspondingly, cells have evolved intricate DNA repair …

Structural evidence for the rare tautomer hypothesis of spontaneous mutagenesis

W Wang, HW Hellinga… - Proceedings of the …, 2011 - National Acad Sciences
Even though high-fidelity polymerases copy DNA with remarkable accuracy, some base-pair
mismatches are incorporated at low frequency, leading to spontaneous mutagenesis. Using …

Terminal deoxynucleotidyl transferase: the story of a misguided DNA polymerase

EA Motea, AJ Berdis - Biochimica et Biophysica Acta (BBA)-Proteins and …, 2010 - Elsevier
Nearly every DNA polymerase characterized to date exclusively catalyzes the incorporation
of mononucleotides into a growing primer using a DNA or RNA template as a guide to direct …

Structure and mechanism of DNA polymerase β

WA Beard, SH Wilson - Chemical reviews, 2006 - ACS Publications
Cells throughout nature contain multiple and overlapping DNA repair pathways that are
essential for maintaining the integrity of genomic DNA. 1, 2 The DNA repair pathway known …

Unlocking the sugar “steric gate” of DNA polymerases

JA Brown, Z Suo - Biochemistry, 2011 - ACS Publications
To maintain genomic stability, ribonucleotide incorporation during DNA synthesis is
controlled predominantly at the DNA polymerase level. A steric clash between the 2 …

[HTML][HTML] Magnesium-induced assembly of a complete DNA polymerase catalytic complex

VK Batra, WA Beard, DD Shock, JM Krahn… - Structure, 2006 - cell.com
The molecular details of the nucleotidyl transferase reaction have remained speculative, as
strategies to trap catalytic intermediates for structure determination utilize substrates lacking …

Structural basis for processive DNA synthesis by yeast DNA polymerase ɛ

M Hogg, P Osterman, GO Bylund, RA Ganai… - Nature structural & …, 2014 - nature.com
DNA polymerase ɛ (Pol ɛ) is a high-fidelity polymerase that has been shown to participate
in leading-strand synthesis during DNA replication in eukaryotic cells. We present here a …

The SMX DNA repair tri-nuclease

HDM Wyatt, RC Laister, SR Martin, CH Arrowsmith… - Molecular cell, 2017 - cell.com
The efficient removal of replication and recombination intermediates is essential for the
maintenance of genome stability. Resolution of these potentially toxic structures requires the …