Revisiting criteria for plant microRNA annotation in the era of big data

MJ Axtell, BC Meyers - The Plant Cell, 2018 - academic.oup.com
Abstract MicroRNAs (miRNAs) are∼ 21-nucleotide-long regulatory RNAs that arise from
endonucleolytic processing of hairpin precursors. Many function as essential …

Recent advances in the regulation of plant miRNA biogenesis

M Li, B Yu - RNA biology, 2021 - Taylor & Francis
MicroRNAs (miRNAs) are essential non-coding riboregulators of gene expression in plants
and animals. In plants, miRNAs guide their effector protein named ARGONAUTE (AGO) to …

The Emergence, Evolution, and Diversification of the miR390-TAS3-ARF Pathway in Land Plants

R Xia, J Xu, BC Meyers - The Plant Cell, 2017 - academic.oup.com
In plants, miR390 directs the production of tasiRNAs from TRANS-ACTING SIRNA3 (TAS3)
transcripts to regulate AUXIN RESPONSIVE FACTOR (ARF) genes, critical for auxin …

Systematic analyses of the MIR172 family members of Arabidopsis define their distinct roles in regulation of APETALA2 during floral transition

DS Ó'Maoiléidigh, AD van Driel, A Singh, Q Sang… - PLoS …, 2021 - journals.plos.org
MicroRNAs (miRNAs) play important roles in regulating flowering and reproduction of
angiosperms. Mature miRNAs are encoded by multiple MIRNA genes that can differ in their …

The plant noncoding transcriptome: a versatile environmental sensor

U Chorostecki, NG Bologna, F Ariel - The EMBO Journal, 2023 - embopress.org
Plant noncoding RNA transcripts have gained increasing attention in recent years due to
growing evidence that they can regulate developmental plasticity. In this review article, we …

MicroRNA482/2118, a miRNA superfamily essential for both disease resistance and plant development

Y Zhang, M Waseem, Z Zeng, J Xu, C Chen… - New …, 2022 - Wiley Online Library
MicroRNAs (miRNAs) are a class of 21–24 nucleotides (nt) noncoding small RNAs
ubiquitously distributed across the plant kingdom. miR482/2118, one of the conserved …

Transgene-free, virus-based gene silencing in plants by artificial microRNAs derived from minimal precursors

AE Cisneros, T Martín-García, A Primc… - Nucleic Acids …, 2023 - academic.oup.com
Artificial microRNAs (amiRNAs) are highly specific, 21-nucleotide (nt) small RNAs designed
to silence target transcripts. In plants, their application as biotechnological tools for …

MicroRNAs mediated plant responses to salt stress

W Islam, A Waheed, H Naveed, F Zeng - Cells, 2022 - mdpi.com
One of the most damaging issues to cultivatable land is soil salinity. While salt stress
influences plant growth and yields at low to moderate levels, severe salt stress is harmful to …

Parallel degradome-seq and DMS-MaPseq substantially revise the miRNA biogenesis atlas in Arabidopsis

X Yan, C Li, K Liu, T Zhang, Q Xu, X Li, J Zhu, Z Wang… - Nature Plants, 2024 - nature.com
MicroRNAs (miRNAs) are produced from highly structured primary transcripts (pri-miRNAs)
and regulate numerous biological processes in eukaryotes. Due to the extreme …

Micro RNA 528, a hub regulator modulating ROS homeostasis via targeting of a diverse set of genes encoding copper‐containing proteins in monocots

H Zhu, C Chen, J Zeng, Z Yun, Y Liu, H Qu… - New …, 2020 - Wiley Online Library
Plant micro RNA s (mi RNA s) regulate vital cellular processes, including responses to
extreme temperatures with which reactive oxygen species (ROS) are often closely …