DNA marker technologies and their applications in aquaculture genetics

ZJ Liu, JF Cordes - Aquaculture, 2004 - Elsevier
The development of DNA-based genetic markers has had a revolutionary impact on animal
genetics. With DNA markers, it is theoretically possible to observe and exploit genetic …

Status and opportunities for genomics research with rainbow trout

GH Thorgaard, GS Bailey, D Williams… - … and Physiology Part B …, 2002 - Elsevier
The rainbow trout (Oncorhynchus mykiss) is one of the most widely studied of model fish
species. Extensive basic biological information has been collected for this species, which …

Development of a standardized DNA database for Chinook salmon

LW Seeb, A Antonovich, MA Banks, TD Beacham… - Fisheries, 2007 - Taylor & Francis
An international multi-laboratory project was conducted to develop a standardized DNA
database for Chinook salmon (Oncorhynchus tshawytscha). This project was in response to …

A consolidated linkage map for rainbow trout (Oncorhynchus mykiss)

KM Nichols, WP Young, RG Danzmann… - Animal …, 2003 - Wiley Online Library
Androgenetic doubled haploid progeny produced from a cross between the Oregon State
University and Arlee clonal rainbow trout (Oncorhynchus mykiss) lines, used for a previous …

Differentiating salmon populations at broad and fine geographical scales with microsatellites and single nucleotide polymorphisms

SR Narum, M Banks, TD Beacham… - Molecular …, 2008 - Wiley Online Library
Single nucleotide polymorphisms (SNPs) are appealing genetic markers due to several
beneficial attributes, but uncertainty remains about how many of these bi‐allelic markers are …

Supportive breeding boosts natural population abundance with minimal negative impacts on fitness of a wild population of C hinook salmon

MA Hess, CD Rabe, JL Vogel, JJ Stephenson… - Molecular …, 2012 - Wiley Online Library
While supportive breeding programmes strive to minimize negative genetic impacts to
populations, case studies have found evidence for reduced fitness of artificially produced …

A second generation genetic map for rainbow trout (Oncorhynchus mykiss)

CE Rexroad, Y Palti, SA Gahr, RL Vallejo - BMC genetics, 2008 - Springer
Background Genetic maps characterizing the inheritance patterns of traits and markers have
been developed for a wide range of species and used to study questions in biomedicine …

Mating success of alternative male phenotypes and evidence for frequency-dependent selection in Chinook salmon, Oncorhynchus tshawytscha

BA Berejikian, DM Van Doornik… - Canadian Journal of …, 2010 - cdnsciencepub.com
As with other species, frequency-dependent selection during reproduction has long been
proposed as an important mechanism in maintaining alternative male reproductive …

Fast sequence-based microsatellite genotyping development workflow

O Lepais, E Chancerel, C Boury, F Salin, A Manicki… - PeerJ, 2020 - peerj.com
Application of high-throughput sequencing technologies to microsatellite genotyping
(SSRseq) has been shown to remove many of the limitations of electrophoresis-based …

Genomic signatures among Oncorhynchus nerka ecotypes to inform conservation and management of endangered Sockeye Salmon

KM Nichols, CC Kozfkay… - Evolutionary Applications, 2016 - Wiley Online Library
Conservation of life history variation is an important consideration for many species with
trade‐offs in migratory characteristics. Many salmonid species exhibit both resident and …