Cis-regulatory sequences in plants: their importance, discovery, and future challenges

RJ Schmitz, E Grotewold, M Stam - The plant cell, 2022 - academic.oup.com
The identification and characterization of cis-regulatory DNA sequences and how they
function to coordinate responses to developmental and environmental cues is of paramount …

NF-Y and the transcriptional activation of CCAAT promoters

D Dolfini, R Gatta, R Mantovani - Critical reviews in biochemistry …, 2012 - Taylor & Francis
The CCAAT box promoter element and NF-Y, the transcription factor (TF) that binds to it,
were among the first cis-elements and trans-acting factors identified; their interplay is …

Sequence-specific transcription factor NF-Y displays histone-like DNA binding and H2B-like ubiquitination

M Nardini, N Gnesutta, G Donati, R Gatta, C Forni… - Cell, 2013 - cell.com
The sequence-specific transcription factor NF-Y binds the CCAAT box, one of the sequence
elements most frequently found in eukaryotic promoters. NF-Y is composed of the NF-YA …

Long noncoding RNA PANDA and scaffold-attachment-factor SAFA control senescence entry and exit

PK Puvvula, RD Desetty, P Pineau, A Marchio… - Nature …, 2014 - nature.com
Cellular senescence is a stable cell cycle arrest that limits the proliferation of pre-cancerous
cells. Here we demonstrate that scaffold-attachment-factor A (SAFA) and the long noncoding …

CONSTANS imparts DNA sequence specificity to the histone fold NF-YB/NF-YC dimer

N Gnesutta, RW Kumimoto, S Swain, M Chiara… - The Plant …, 2017 - academic.oup.com
Abstract Nuclear Factor Y (NF-Y) is a heterotrimeric transcription factor that binds CCAAT
elements. The NF-Y trimer is composed of a Histone Fold Domain (HFD) dimer (NF-YB/NF …

Recent advances in the applications of promoter engineering for the optimization of metabolite biosynthesis

N Xu, L Wei, J Liu - World Journal of Microbiology and Biotechnology, 2019 - Springer
Cell metabolism in living organisms is largely regulated at the transcriptional level, and the
promoters are regarded as basic regulatory elements responsible for transcription initiation …

Nuclear factor OsNF-YC5 modulates rice seed germination by regulating synergistic hormone signaling

X Jin, X Li, Z Xie, Y Sun, L Jin, T Hu, J Huang - Plant Physiology, 2023 - academic.oup.com
Regulation of seed dormancy/germination is of great importance for seedling establishment
and crop production. Nuclear factor-Y (NF-Y) transcription factors regulate plant growth and …

A new link between diabetes and cancer: enhanced WNT/β-catenin signaling by high glucose

C García-Jiménez, JM García-Martínez… - Journal of …, 2014 - jme.bioscientifica.com
Extensive epidemiological studies suggest that the diabetic population is at higher risk of
site-specific cancers. The diabetes–cancer link has been hypothesized to rely on various …

Integrated multi-omics analysis of zinc-finger proteins uncovers roles in RNA regulation

ML Gosztyla, L Zhan, S Olson, X Wei, J Naritomi… - Molecular cell, 2024 - cell.com
RNA interactome studies have revealed that hundreds of zinc-finger proteins (ZFPs) are
candidate RNA-binding proteins (RBPs), yet their RNA substrates and functional …

Expression of zma-miR169 miRNAs and their target ZmNF-YA genes in response to abiotic stress in maize leaves

M Luan, M Xu, Y Lu, L Zhang, Y Fan, L Wang - Gene, 2015 - Elsevier
The miR169 miRNA family is highly conserved in plants. Its members regulate the
expression of genes encoding the universal transcription factor subunit NUCLEAR FACTOR …