Environmental factors shaping the ecological niches of ammonia-oxidizing archaea

TH Erguder, N Boon, L Wittebolle… - FEMS microbiology …, 2009 - academic.oup.com
For more than 100 years it was believed that bacteria were the only group responsible for
the oxidation of ammonia. However, recently, a new strain of archaea bearing a putative …

Phylogenetic and functional marker genes to study ammonia-oxidizing microorganisms (AOM) in the environment

P Junier, V Molina, C Dorador, O Hadas… - Applied Microbiology …, 2010 - Springer
The oxidation of ammonia plays a significant role in the transformation of fixed nitrogen in
the global nitrogen cycle. Autotrophic ammonia oxidation is known in three groups of …

Incorporating 16S gene copy number information improves estimates of microbial diversity and abundance

SW Kembel, M Wu, JA Eisen… - PLoS computational …, 2012 - journals.plos.org
The abundance of different SSU rRNA (“16S”) gene sequences in environmental samples is
widely used in studies of microbial ecology as a measure of microbial community structure …

Ammonia-oxidizing microbial communities in reactors with efficient nitrification at low-dissolved oxygen

CM Fitzgerald, P Camejo, JZ Oshlag, DR Noguera - Water research, 2015 - Elsevier
Ammonia-oxidizing microbial communities involved in ammonia oxidation under low
dissolved oxygen (DO) conditions (< 0.3 mg/L) were investigated using chemostat reactors …

Bacterial communities in different sections of a municipal wastewater treatment plant revealed by 16S rDNA 454 pyrosequencing

L Ye, T Zhang - Applied microbiology and biotechnology, 2013 - Springer
In this study, we successfully demonstrated that 454 pyrosequencing was a powerful
approach for investigating the bacterial communities in the activated sludge, digestion …

Effects of combined biochar and organic fertilizer on nitrous oxide fluxes and the related nitrifier and denitrifier communities in a saline-alkali soil

Y Shi, X Liu, Q Zhang - Science of the total environment, 2019 - Elsevier
This study intended to evaluate the combined effects of both biochar and organic fertilizer on
nitrous oxide (N 2 O) fluxes and composition of nitrifier and denitrifier of saline-alkali soil …

Enrichment and characterization of an autotrophic ammonia-oxidizing archaeon of mesophilic crenarchaeal group I. 1a from an agricultural soil

MY Jung, SJ Park, D Min, JS Kim… - Applied and …, 2011 - Am Soc Microbiol
Soil nitrification is an important process for agricultural productivity and environmental
pollution. Though one cultivated representative of ammonia-oxidizing Archaea from soil has …

Cultivation of autotrophic ammonia-oxidizing archaea from marine sediments in coculture with sulfur-oxidizing bacteria

BJ Park, SJ Park, DN Yoon, S Schouten… - Applied and …, 2010 - Am Soc Microbiol
The role of ammonia-oxidizing archaea (AOA) in nitrogen cycling in marine sediments
remains poorly characterized. In this study, we enriched and characterized AOA from marine …

Biological nitrification inhibitor co-application with urease inhibitor or biochar yield different synergistic interaction effects on NH3 volatilization, N leaching, and N use …

T Lan, Y Huang, X Song, O Deng, W Zhou, L Luo… - Environmental …, 2022 - Elsevier
Nitrogen management measures (NMMs) such as the application of urease inhibitors (UIs),
synthetic nitrification inhibitors (SNIs), and biochar (BC) are commonly used in mitigating …

Moderate precipitation reduction enhances nitrogen cycling and soil nitrous oxide emissions in a semi‐arid grassland

K Zhang, Y Qiu, Y Zhao, S Wang, J Deng… - Global Change …, 2023 - Wiley Online Library
The ongoing climate change is predicted to induce more weather extremes such as frequent
drought and high‐intensity precipitation events, causing more severe drying‐rewetting …