[HTML][HTML] Clinical information extraction applications: a literature review
Background With the rapid adoption of electronic health records (EHRs), it is desirable to
harvest information and knowledge from EHRs to support automated systems at the point of …
harvest information and knowledge from EHRs to support automated systems at the point of …
A review of approaches to identifying patient phenotype cohorts using electronic health records
C Shivade, P Raghavan… - Journal of the …, 2014 - academic.oup.com
Objective To summarize literature describing approaches aimed at automatically identifying
patients with a common phenotype. Materials and methods We performed a review of …
patients with a common phenotype. Materials and methods We performed a review of …
Mayo clinical Text Analysis and Knowledge Extraction System (cTAKES): architecture, component evaluation and applications
We aim to build and evaluate an open-source natural language processing system for
information extraction from electronic medical record clinical free-text. We describe and …
information extraction from electronic medical record clinical free-text. We describe and …
Automated machine learning for healthcare and clinical notes analysis
A Mustafa, M Rahimi Azghadi - Computers, 2021 - mdpi.com
Machine learning (ML) has been slowly entering every aspect of our lives and its positive
impact has been astonishing. To accelerate embedding ML in more applications and …
impact has been astonishing. To accelerate embedding ML in more applications and …
Validating drug repurposing signals using electronic health records: a case study of metformin associated with reduced cancer mortality
Objectives Drug repurposing, which finds new indications for existing drugs, has received
great attention recently. The goal of our work is to assess the feasibility of using electronic …
great attention recently. The goal of our work is to assess the feasibility of using electronic …
[HTML][HTML] An information extraction framework for cohort identification using electronic health records
Abstract Information extraction (IE), a natural language processing (NLP) task that
automatically extracts structured or semi-structured information from free text, has become …
automatically extracts structured or semi-structured information from free text, has become …
ICD-9 tobacco use codes are effective identifiers of smoking status
Objective To evaluate the validity of, characterize the usage of, and propose potential
research applications for International Classification of Diseases, Ninth Revision (ICD-9) …
research applications for International Classification of Diseases, Ninth Revision (ICD-9) …
MedXN: an open source medication extraction and normalization tool for clinical text
Abstract Objective We developed the Medication Extraction and Normalization (MedXN)
system to extract comprehensive medication information and normalize it to the most …
system to extract comprehensive medication information and normalize it to the most …
Clinical documentation variations and NLP system portability: a case study in asthma birth cohorts across institutions
Objective To assess clinical documentation variations across health care institutions using
different electronic medical record systems and investigate how they affect natural language …
different electronic medical record systems and investigate how they affect natural language …
Leveraging informatics for genetic studies: use of the electronic medical record to enable a genome-wide association study of peripheral arterial disease
Background: There is significant interest in leveraging the electronic medical record (EMR)
to conduct genome-wide association studies (GWAS). Methods: A biorepository of DNA and …
to conduct genome-wide association studies (GWAS). Methods: A biorepository of DNA and …