Genomics-based systems and multi-disciplinary approaches to unlock complex gene networks underlying wood formation

A Piot, YA El-Kassaby, I Porth - Current Forestry Reports, 2022 - Springer
Abstract Purpose of Review Wood represents an important economic natural resource and
the molecular regulatory mechanisms underlying its formation are best studied through …

Genome-wide identification and expression analysis of the MYB transcription factor in moso bamboo (Phyllostachys edulis)

K Yang, Y Li, S Wang, X Xu, H Sun, H Zhao, X Li, Z Gao - PeerJ, 2019 - peerj.com
The MYB family, one of the largest transcription factor (TF) families in the plant kingdom,
plays vital roles in cell formation, morphogenesis and signal transduction, as well as …

High-density genetic linkage mapping reveals low stability of QTLs across environments for economic traits in Eucalyptus

X Zhu, Q Weng, D Bush, C Zhou, H Zhao… - Frontiers in Plant …, 2023 - frontiersin.org
Introduction Eucalyptus urophylla, E. tereticornis and their hybrids are the most important
commercial forest tree species in South China where they are grown for pulpwood and solid …

Physiological and RNA-seq analyses provide insights into the response mechanism of the Cf-10-mediated resistance to Cladosporium fulvum infection in tomato

G Liu, J Liu, C Zhang, X You, T Zhao, J Jiang… - Plant molecular …, 2018 - Springer
Key message Based on the physiological and RNA-seq analysis, some progress has been
made in elucidating the Cf-10-mediated resistance responses to C. fulvum infection in …

Transcriptome Analysis of the Cf-13-Mediated Hypersensitive Response of Tomato to Cladosporium fulvum Infection

X Jiang, Y Li, R Li, Y Gao, Z Liu, H Yang, J Li… - International Journal of …, 2022 - mdpi.com
Tomato leaf mold disease caused by Cladosporium fulvum (C. fulvum) is one of the most
common diseases affecting greenhouse tomato production. Cf proteins can recognize …

Integrative analysis of the transcriptome, targeted metabolome, and anatomical observation provides insights into the brassinosteroids-mediated seasonal variation of …

J Yang, R Guo, Y Yang, Y Luo, G Wei, L Bian… - Industrial Crops and …, 2024 - Elsevier
Chinese fir (Cunninghamia lanceolata) is widely planted in southern China due to its strong
adaptability and fast-growing. Wood formation is derived from the periodic changes of …

[HTML][HTML] Pigment variation and transcriptional response of the pigment synthesis pathway in the S2309 triple-color ornamental kale (Brassica oleracea L. var. acephala …

X Liu, B Zhang, J Wu, Z Li, F Han, Z Fang, L Yang… - Genomics, 2020 - Elsevier
Ornamental kale is popular because of its colorful leaves and few studies have investigated
the mechanism of color changes. In this study, an ornamental kale line (S2309) with three …

Transcriptome analysis provides insights into wood formation during larch tree aging

WF Li, WH Yang, SG Zhang, SY Han, LW Qi - Tree Genetics & Genomes, 2017 - Springer
Tree age affects wood formation and yield. However, the underlying mechanisms are poorly
understood, particularly at the molecular level. In this study, we investigated the …

Chinese fir breeding in the high-throughput sequencing era: Insights from SNPs

H Zheng, D Hu, R Wei, S Yan, R Wang - Forests, 2019 - mdpi.com
Knowledge on population diversity and structure is of fundamental importance for conifer
breeding programs. In this study, we concentrated on the development and application of …

Xylem Transcriptome Analysis in Contrasting Wood Phenotypes of Eucalyptus urophylla × tereticornis Hybrids

X Zhu, J He, C Zhou, Q Weng, S Chen, D Bush, F Li - Forests, 2022 - mdpi.com
An investigation of the effects of two important post-transcriptional regulatory mechanisms,
gene transcription and alternative splicing (AS), on the wood formation of Eucalyptus …