Immunoglobulin germline gene variation and its impact on human disease

I Mikocziova, V Greiff, LM Sollid - Genes & Immunity, 2021 - nature.com
Immunoglobulins (Ig) play an important role in the immune system both when expressed as
antigen receptors on the cell surface of B cells and as antibodies secreted into extracellular …

Computational strategies for dissecting the high-dimensional complexity of adaptive immune repertoires

E Miho, A Yermanos, CR Weber, CT Berger… - Frontiers in …, 2018 - frontiersin.org
The adaptive immune system recognizes antigens via an immense array of antigen-binding
antibodies and T-cell receptors, the immune repertoire. The interrogation of immune …

Pan-vaccine analysis reveals innate immune endotypes predictive of antibody responses to vaccination

S Fourati, LE Tomalin, MP Mulè, DG Chawla… - Nature …, 2022 - nature.com
Several studies have shown that the pre-vaccination immune state is associated with the
antibody response to vaccination. However, the generalizability and mechanisms that …

CoV-AbDab: the coronavirus antibody database

MIJ Raybould, A Kovaltsuk, C Marks… - Bioinformatics, 2021 - academic.oup.com
Motivation The emergence of a novel strain of betacoronavirus, SARS-CoV-2, has led to a
pandemic that has been associated with over 700 000 deaths as of August 5, 2020 …

Human B cell clonal expansion and convergent antibody responses to SARS-CoV-2

SCA Nielsen, F Yang, KJL Jackson, RA Hoh… - Cell host & …, 2020 - cell.com
B cells are critical for the production of antibodies and protective immunity to viruses. Here
we show that patients infected with severe acute respiratory syndrome coronavirus 2 (SARS …

Single-cell multi-omics reveals dyssynchrony of the innate and adaptive immune system in progressive COVID-19

A Unterman, TS Sumida, N Nouri, X Yan… - Nature …, 2022 - nature.com
Dysregulated immune responses against the SARS-CoV-2 virus are instrumental in severe
COVID-19. However, the immune signatures associated with immunopathology are poorly …

An influenza H1 hemagglutinin stem-only immunogen elicits a broadly cross-reactive B cell response in humans

SF Andrews, LY Cominsky, GD Shimberg… - Science Translational …, 2023 - science.org
Current yearly seasonal influenza vaccines primarily induce an antibody response directed
against the immunodominant but continually diversifying hemagglutinin (HA) head region …

Immunoglobulin germline gene polymorphisms influence the function of SARS-CoV-2 neutralizing antibodies

P Pushparaj, A Nicoletto, DJ Sheward, H Das… - Immunity, 2023 - cell.com
The human immunoglobulin heavy-chain (IGH) locus is exceptionally polymorphic, with high
levels of allelic and structural variation. Thus, germline IGH genotypes are personal, which …

Host factors impact vaccine efficacy: implications for seasonal and universal influenza vaccine programs

S Dhakal, SL Klein - Journal of virology, 2019 - Am Soc Microbiol
Influenza is a global public health problem. Current seasonal influenza vaccines have highly
variable efficacy, and thus attempts to develop broadly protective universal influenza …

Allelic polymorphism controls autoreactivity and vaccine elicitation of human broadly neutralizing antibodies against influenza virus

M Sangesland, AT de la Peña, S Boyoglu-Barnum… - Immunity, 2022 - cell.com
Human broadly neutralizing antibodies (bnAbs) targeting the hemagglutinin stalk of group 1
influenza A viruses (IAVs) are biased for IGHV1-69 alleles that use phenylalanine (F54) but …