[HTML][HTML] A 25-year odyssey of genomic technology advances and structural variant discovery

D Porubsky, EE Eichler - Cell, 2024 - cell.com
This perspective focuses on advances in genome technology over the last 25 years and
their impact on germline variant discovery within the field of human genetics. The field has …

[HTML][HTML] Recurrent inversion polymorphisms in humans associate with genetic instability and genomic disorders

D Porubsky, W Höps, H Ashraf, PH Hsieh… - Cell, 2022 - cell.com
Unlike copy number variants (CNVs), inversions remain an underexplored genetic variation
class. By integrating multiple genomic technologies, we discover 729 inversions in 41 …

Inversions on human chromosomes

K Kosuthova, R Solc - … Journal of Medical Genetics Part A, 2023 - Wiley Online Library
Human chromosome inversions are types of balanced structural variations, making them
difficult to analyze. Thanks to PEM (paired‐end sequencing and mapping), there has been …

Recurrent inversion toggling and great ape genome evolution

D Porubsky, AD Sanders, W Höps, PH Hsieh… - Nature …, 2020 - nature.com
Inversions play an important role in disease and evolution but are difficult to characterize
because their breakpoints map to large repeats. We increased by sixfold the number (n …

Evolutionary and functional impact of common polymorphic inversions in the human genome

C Giner-Delgado, S Villatoro, J Lerga-Jaso… - Nature …, 2019 - nature.com
Inversions are one type of structural variants linked to phenotypic differences and adaptation
in multiple organisms. However, there is still very little information about polymorphic …

Inversion variants in human and primate genomes

CR Catacchio, FAM Maggiolini, P D'addabbo… - Genome …, 2018 - genome.cshlp.org
For many years, inversions have been proposed to be a direct driving force in speciation
since they suppress recombination when heterozygous. Inversions are the most common …

Single-cell strand sequencing of a macaque genome reveals multiple nested inversions and breakpoint reuse during primate evolution

FAM Maggiolini, AD Sanders, CJ Shew… - Genome …, 2020 - genome.cshlp.org
Rhesus macaque is an Old World monkey that shared a common ancestor with human∼ 25
Myr ago and is an important animal model for human disease studies. A deep …

Determining the impact of uncharacterized inversions in the human genome by droplet digital PCR

M Puig, J Lerga-Jaso, C Giner-Delgado… - Genome …, 2020 - genome.cshlp.org
Despite the interest in characterizing genomic variation, the presence of large repeats at the
breakpoints hinders the analysis of many structural variants. This is especially problematic …

A high-resolution map of small-scale inversions in the gibbon genome

L Mercuri, D Palmisano, A L'Abbate… - Genome …, 2022 - genome.cshlp.org
Gibbons are the most speciose family of living apes, characterized by a diverse
chromosome number and rapid rate of large-scale rearrangements. Here we performed …

Chromoanagenesis Event Underlies a de novo Pericentric and Multiple Paracentric Inversions in a Single Chromosome Causing Coffin–Siris Syndrome

CM Grochowski, ACV Krepischi, J Eisfeldt, H Du… - Frontiers in …, 2021 - frontiersin.org
Chromoanagenesis is a descriptive term that encompasses classes of catastrophic
mutagenic processes that generate localized and complex chromosome rearrangements in …