Causes and consequences of RNA polymerase II stalling during transcript elongation

M Noe Gonzalez, D Blears, JQ Svejstrup - Nature reviews Molecular …, 2021 - nature.com
The journey of RNA polymerase II (Pol II) as it transcribes a gene is anything but a smooth
ride. Transcript elongation is discontinuous and can be perturbed by intrinsic regulatory …

The DNA damage response to transcription stress

H Lans, JHJ Hoeijmakers, W Vermeulen… - … reviews Molecular cell …, 2019 - nature.com
The spatiotemporal control of RNA polymerase II (Pol II)-mediated gene transcription is
tightly and intricately regulated. In addition, preservation of the integrity of the DNA template …

Mitochondrial DNA integrity: role in health and disease

P Sharma, H Sampath - Cells, 2019 - mdpi.com
As the primary cellular location for respiration and energy production, mitochondria serve in
a critical capacity to the cell. Yet, by virtue of this very function of respiration, mitochondria …

Transcription-coupled DNA repair: two decades of progress and surprises

PC Hanawalt, G Spivak - Nature reviews Molecular cell biology, 2008 - nature.com
Expressed genes are scanned by translocating RNA polymerases, which sensitively detect
DNA damage and initiate transcription-coupled repair (TCR), a subpathway of nucleotide …

Structural basis for the initiation of eukaryotic transcription-coupled DNA repair

J Xu, I Lahiri, W Wang, A Wier, MA Cianfrocco, J Chong… - Nature, 2017 - nature.com
Eukaryotic transcription-coupled repair (TCR) is an important and well-conserved sub-
pathway of nucleotide excision repair that preferentially removes DNA lesions from the …

Oxidative stress in developmental origins of disease: teratogenesis, neurodevelopmental deficits, and cancer

PG Wells, GP McCallum, CS Chen… - Toxicological …, 2009 - academic.oup.com
In the developing embryo and fetus, endogenous or xenobiotic-enhanced formation of
reactive oxygen species (ROS) like hydroxyl radicals may adversely alter development by …

DNA Repair Mechanisms and the Bypass of DNA Damage in Saccharomyces cerevisiae

S Boiteux, S Jinks-Robertson - Genetics, 2013 - academic.oup.com
DNA repair mechanisms are critical for maintaining the integrity of genomic DNA, and their
loss is associated with cancer predisposition syndromes. Studies in Saccharomyces …

UV-sensitive syndrome protein UVSSA recruits USP7 to regulate transcription-coupled repair

P Schwertman, A Lagarou, DHW Dekkers, A Raams… - Nature …, 2012 - nature.com
Transcription-coupled nucleotide-excision repair (TC-NER) is a subpathway of NER that
efficiently removes the highly toxic RNA polymerase II blocking lesions in DNA. Defective TC …

The cellular response to transcription-blocking DNA damage

LH Gregersen, JQ Svejstrup - Trends in Biochemical Sciences, 2018 - cell.com
In response to transcription-blocking DNA lesions such as those generated by UV
irradiation, cells activate a multipronged DNA damage response. This response …

DNAPKcs-dependent arrest of RNA polymerase II transcription in the presence of DNA breaks

T Pankotai, C Bonhomme, D Chen… - Nature structural & …, 2012 - nature.com
DNA double-strand break (DSB) repair interferes with ongoing cellular processes, including
replication and transcription. Although the process of replication stalling upon collision of …