Dissecting phylogenetic fuzzy weighting: theory and application in metacommunity phylogenetics

LDS Duarte, VJ Debastiani… - Methods in Ecology …, 2016 - Wiley Online Library
Metacommunity phylogenetics aims at evaluating environmental and/or historical factors
driving clade distribution. Phylogenetic fuzzy weighting (PFW) describes clade distribution …

Effects of dispersal and environmental heterogeneity on the replacement and nestedness components of β‐diversity

AT Gianuca, SAJ Declerck, P Lemmens… - Ecology, 2017 - Wiley Online Library
Traditionally metacommunity studies have quantified the relative importance of dispersal
and environmental processes on observed β‐diversity. Separating β‐diversity into its …

No substitute for real data: a cautionary note on the use of phylogenies from birth–death polytomy resolvers for downstream comparative analyses

DL Rabosky - Evolution, 2015 - academic.oup.com
The statistical estimation of phylogenies is always associated with uncertainty, and
accommodating this uncertainty is an important component of modern phylogenetic …

Environmental and anthropogenic factors structuring waterbird habitats of tropical coastal lagoons: Implications for management

DC Tavares, DL Guadagnin, JF de Moura… - Biological …, 2015 - Elsevier
Tropical coastal lagoons are among the most threatened ecosystems on Earth due to
multiple factors. The loss and degradation of coastal lagoons can adversely affect …

Birds of the Campos Sulinos

GA Bencke, RA Dias, CS Fontana - South Brazilian grasslands: ecology …, 2023 - Springer
The degradation of the Campos Sulinos, which are part of the Pampa and Atlantic Forest
biomes in Brazil, has been extensively discussed in the scientific community and society as …

Using phylogeny and functional traits for assessing community assembly along environmental gradients: A deterministic process driven by elevation

J Xu, Y Chen, L Zhang, Y Chai, M Wang… - Ecology and …, 2017 - Wiley Online Library
Community assembly processes is the primary focus of community ecology. Using
phylogenetic‐based and functional trait‐based methods jointly to explore these processes …

Differences in soil water and nutrients under catchment afforestation and natural restoration shape herbaceous communities on the Chinese Loess Plateau

H Dang, J Li, J Xu, G Chu, J Zhang, Y Yu… - Forest Ecology and …, 2022 - Elsevier
Abstract The Chinese Loess Plateau (CLP) is one of the areas with the most serious soil
erosion worldwide. Vegetation restoration is the main way to control soil erosion and combat …

Local and regional drivers of ant communities in forest-grassland ecotones in South Brazil: A taxonomic and phylogenetic approach

W Dröse, LR Podgaiski, CF Dias, MS Mendonca Jr - PLoS One, 2019 - journals.plos.org
Understanding biological community distribution patterns and their drivers across different
scales is one of the major goals of community ecology in a rapidly changing world …

PCPS–an R-package for exploring phylogenetic eigenvectors across metacommunities

VJ Debastiani, LS Duarte - Frontiers of biogeography, 2014 - escholarship.org
PCPS is an R package for exploring phylogenetic eigenvectors across metacommunities. It
offers a set of functions for analyzing principal coordinates of phylogenetic structure (PCPS) …

A taxonomic, functional, and phylogenetic perspective on the community assembly of passerine birds along an elevational gradient in southwest China

X He, K Luo, C Brown, L Lin - Ecology and Evolution, 2018 - Wiley Online Library
Integrating multiple facets of biodiversity to describe spatial and temporal distribution
patterns is one way of revealing the mechanisms driving community assembly. We assessed …