ENMeval 2.0: Redesigned for customizable and reproducible modeling of species' niches and distributions

JM Kass, R Muscarella, PJ Galante… - Methods in Ecology …, 2021 - Wiley Online Library
Quantitative evaluations to optimize complexity have become standard for avoiding
overfitting of ecological niche models (ENMs) that estimate species' potential geographic …

Cross‐validation strategies for data with temporal, spatial, hierarchical, or phylogenetic structure

DR Roberts, V Bahn, S Ciuti, MS Boyce, J Elith… - …, 2017 - Wiley Online Library
Ecological data often show temporal, spatial, hierarchical (random effects), or phylogenetic
structure. Modern statistical approaches are increasingly accounting for such dependencies …

Predictive performance of presence‐only species distribution models: a benchmark study with reproducible code

R Valavi, G Guillera‐Arroita… - Ecological …, 2022 - Wiley Online Library
Species distribution modeling (SDM) is widely used in ecology and conservation. Currently,
the most available data for SDM are species presence‐only records (available through …

The global distribution of known and undiscovered ant biodiversity

JM Kass, B Guénard, KL Dudley, CN Jenkins… - Science …, 2022 - science.org
Invertebrates constitute the majority of animal species and are critical for ecosystem
functioning and services. Nonetheless, global invertebrate biodiversity patterns and their …

[HTML][HTML] MaxEnt Modelling and Impact of Climate Change on Habitat Suitability Variations of Economically Important Chilgoza Pine (Pinus gerardiana Wall.) in South …

AM Khan, Q Li, Z Saqib, N Khan, T Habib, N Khalid… - Forests, 2022 - mdpi.com
Chilgoza pine is an economically and ecologically important evergreen coniferous tree
species of the dry and rocky temperate zone, and a native of south Asia. This species is …

Opening the black box: An open‐source release of Maxent

SJ Phillips, RP Anderson, M Dudík, RE Schapire… - …, 2017 - Wiley Online Library
This software note announces a new open‐source release of the Maxent software for
modeling species distributions from occurrence records and environmental data, and …

[HTML][HTML] blockCV: An r package for generating spatially or environmentally separated folds for k-fold cross-validation of species distribution models

R Valavi, J Elith, JJ Lahoz-Monfort, G Guillera-Arroita - Biorxiv, 2018 - biorxiv.org
When applied to structured data, conventional random cross-validation techniques can lead
to underestimation of prediction error, and may result in inappropriate model selection. We …

[HTML][HTML] SDMtoolbox 2.0: the next generation Python-based GIS toolkit for landscape genetic, biogeographic and species distribution model analyses

JL Brown, JR Bennett, CM French - PeerJ, 2017 - peerj.com
SDMtoolbox 2.0 is a software package for spatial studies of ecology, evolution, and genetics.
The release of SDMtoolbox 2.0 allows researchers to use the most current ArcGIS software …

Paintings predict the distribution of species, or the challenge of selecting environmental predictors and evaluation statistics

Y Fourcade, AG Besnard… - Global Ecology and …, 2018 - Wiley Online Library
Aim Species distribution modelling, a family of statistical methods that predicts species
distributions from a set of occurrences and environmental predictors, is now routinely …

spThin: an R package for spatial thinning of species occurrence records for use in ecological niche models

ME Aiello‐Lammens, RA Boria, A Radosavljevic… - …, 2015 - Wiley Online Library
Spatial thinning of species occurrence records can help address problems associated with
spatial sampling biases. Ideally, thinning removes the fewest records necessary to …