B Xu, J Gao, C Li - Biochemical and biophysical research communications, 2012 - Elsevier
Fragment assembly is one of the most important problems of sequence assembly. Algorithms for DNA fragment assembly using de Bruijn graph have been widely used. These …
NB Rizvandi, J Taheri, R Moraveji… - … on Parallel and …, 2012 - ieeexplore.ieee.org
In this paper, we study the dependency between MapReduce configuration parameters and network load of fixed-size MapReduce jobs during the shuffle phase, then we propose an …
G Liu, M Liu, D Chen, L Chen, J Zhu, B Zhou… - Current …, 2016 - ingentaconnect.com
Background: Identifying protein-ligand binding sites is an important step to the characterizing of molecular function. Although many ligand-binding site prediction methods …
G Dong, X Fu, H Li - Journal of Computational Methods in …, 2016 - content.iospress.com
DNA sequence assembly and gene homology comparison are the most basic and most frequently used methods in bioinformatics, which can be used to estimate the genetic …
GM Siddesh, A Anurag, D Shah, E Uppal, I Mishra… - researchgate.net
Phylogenetic analyses have become essential to research on the evolutionary tree of life. Distance-matrix methods of phylogenetic analysis explicitly rely on a measure of" genetic …
NB Rizvandi, J Taheri, R Moraveji… - arXiv preprint arXiv …, 2013 - arxiv.org
Recently, businesses have started using MapReduce as a popular computation framework for processing large amount of data, such as spam detection, and different data mining …
Multiple sequence alignment is an important problem and popular in the molecular biology. This is a basic problem that its solution could be used to proof and discover the similarity of …