Rare coding variant analysis for human diseases across biobanks and ancestries

SJ Jurgens, X Wang, SH Choi, LC Weng, S Koyama… - Nature Genetics, 2024 - nature.com
Large-scale sequencing has enabled unparalleled opportunities to investigate the role of
rare coding variation in human phenotypic variability. Here, we present a pan-ancestry …

A call to action to scale up research and clinical genomic data sharing

Z Stark, D Glazer, O Hofmann, A Rendon… - Nature Reviews …, 2024 - nature.com
Genomic data from millions of individuals have been generated worldwide to drive discovery
and clinical impact in precision medicine. Lowering the barriers to using these data …

A deep catalogue of protein-coding variation in 983,578 individuals

KY Sun, X Bai, S Chen, S Bao, C Zhang, M Kapoor… - Nature, 2024 - nature.com
Rare coding variants that substantially affect function provide insights into the biology of a
gene,–. However, ascertaining the frequency of such variants requires large sample sizes …

Yield of genetic association signals from genomes, exomes and imputation in the UK Biobank

SM Gaynor, T Joseph, X Bai, Y Zou, B Boutkov… - Nature Genetics, 2024 - nature.com
Abstract Whole-genome sequencing (WGS), whole-exome sequencing (WES) and array
genotyping with imputation (IMP) are common strategies for assessing genetic variation and …

Screening embryos for polygenic disease risk: a review of epidemiological, clinical, and ethical considerations

A Capalbo, G de Wert, H Mertes… - Human reproduction …, 2024 - academic.oup.com
BACKGROUND The genetic composition of embryos generated by in vitro fertilization (IVF)
can be examined with preimplantation genetic testing (PGT). Until recently, PGT was limited …

Protein-truncating variants in BSN are associated with severe adult-onset obesity, type 2 diabetes and fatty liver disease

Y Zhao, M Chukanova, KA Kentistou… - Nature Genetics, 2024 - nature.com
Obesity is a major risk factor for many common diseases and has a substantial heritable
component. To identify new genetic determinants, we performed exome-sequence analyses …

Prequalification of genome-based newborn screening for severe childhood genetic diseases through federated training based on purifying hyperselection

SF Kingsmore, M Wright, LD Smith, Y Liang… - The American Journal of …, 2024 - cell.com
Genome-sequence-based newborn screening (gNBS) has substantial potential to improve
outcomes in hundreds of severe childhood genetic disorders (SCGDs). However, a major …

Imputation accuracy across global human populations

JL Cahoon, X Rui, E Tang, C Simons, J Langie… - The American Journal of …, 2024 - cell.com
Genotype imputation is now fundamental for genome-wide association studies but lacks
fairness due to the underrepresentation of references from non-European ancestries. The …

Genetics of Latin American Diversity Project: Insights into population genetics and association studies in admixed groups in the Americas

V Borda, DP Loesch, B Guo, R Laboulaye… - Cell genomics, 2024 - cell.com
Latin Americans are underrepresented in genetic studies, increasing disparities in
personalized genomic medicine. Despite available genetic data from thousands of Latin …

MGA loss-of-function variants cause premature ovarian insufficiency

S Tang, T Guo, C Song, L Wang, J Zhang… - The Journal of Clinical …, 2024 - jci.org
Although premature ovarian insufficiency (POI), a common cause of female infertility and
subfertility, has a well-established hereditary component, the genetic factors currently …