Understanding plant pathogen interactions using spatial and single-cell technologies

J Zhu, A Moreno-Pérez, G Coaker - Communications Biology, 2023 - nature.com
Plants are in contact with diverse pathogens and microorganisms. Intense investigation over
the last 30 years has resulted in the identification of multiple immune receptors in model and …

[HTML][HTML] Analysis of meristems and plant regeneration at single-cell resolution

RY Liao, JW Wang - Current opinion in plant biology, 2023 - Elsevier
Rapid development of high-throughput single-cell RNA sequencing (scRNA-seq)
technologies offers exciting opportunities to reveal new and rare cell types, previously …

Best practices for the execution, analysis, and data storage of plant single-cell/nucleus transcriptomics

C Grones, T Eekhout, D Shi, M Neumann… - The Plant …, 2024 - academic.oup.com
Single-cell and single-nucleus RNA-sequencing technologies capture the expression of
plant genes at an unprecedented resolution. Therefore, these technologies are gaining …

Single-nuclei transcriptome analysis of the shoot apex vascular system differentiation in Populus

D Conde, PM Triozzi, WJ Pereira, HW Schmidt… - …, 2022 - journals.biologists.com
Differentiation of stem cells in the plant apex gives rise to aerial tissues and organs.
Presently, we lack a lineage map of the shoot apex cells in woody perennials–a crucial gap …

Phloem development

CS Hardtke - New Phytologist, 2023 - Wiley Online Library
The evolution of the plant vascular system is a key process in Earth history because it
enabled plants to conquer land and transform the terrestrial surface. Among the vascular …

Resolving plant development in space and time with single-cell genomics

TM Nolan, R Shahan - Current opinion in plant biology, 2023 - Elsevier
Single-cell genomics technologies are ushering in a new research era. In this review, we
summarize the benefits and current challenges of using these technologies to probe the …

Progressive meristem and single-cell transcriptomes reveal the regulatory mechanisms underlying maize inflorescence development and sex differentiation

Y Sun, L Dong, L Kang, W Zhong, D Jackson, F Yang - Molecular Plant, 2024 - cell.com
Maize develops separate ear and tassel inflorescences with initially similar morphology but
ultimately different architecture and sexuality. The detailed regulatory mechanisms …

The CLE33 peptide represses phloem differentiation via autocrine and paracrine signaling in Arabidopsis

S Carbonnel, S Cornelis, O Hazak - Communications Biology, 2023 - nature.com
Plant meristems require a constant supply of photoassimilates and hormones to the dividing
meristematic cells. In the growing root, such supply is delivered by protophloem sieve …

[HTML][HTML] Putative pectate lyase PLL12 and callose deposition through polar CALS7 are necessary for long-distance phloem transport in Arabidopsis

L Kalmbach, M Bourdon, I Belevich, J Safran… - Current Biology, 2023 - cell.com
In plants, the phloem distributes photosynthetic products for metabolism and storage over
long distances. It relies on specialized cells, the sieve elements, which are enucleated and …

The transcription factor AtMYB12 is part of a feedback loop regulating cell division orientation in the root meristem vasculature

B Wybouw, HE Arents, B Yang, J Nolf… - Journal of …, 2023 - academic.oup.com
Transcriptional networks are crucial to integrate various internal and external signals into
optimal responses during plant growth and development. In Arabidopsis thaliana, primary …