Challenges and opportunities for global genomic surveillance strategies in the COVID-19 era

T Ling-Hu, E Rios-Guzman, R Lorenzo-Redondo… - Viruses, 2022 - mdpi.com
Global SARS-CoV-2 genomic surveillance efforts have provided critical data on the ongoing
evolution of the virus to inform best practices in clinical care and public health throughout the …

Comparative analysis of commonly used bioinformatics software based on omics

M Xu, C Xu, M Chen, Z Xiao, Y Wang, Y Xu, D Xu - Gene Reports, 2023 - Elsevier
As a widely used technology at the intersection of multiple disciplines in the field of natural
sciences, bioinformatics has received much attention from scholars for its development and …

Phylogenetic Investigations of Dengue 2019–2021 Outbreak in Guadeloupe and Martinique Caribbean Islands

M Garcia--Van Smévoorde, G Piorkowski, L Emboulé… - Pathogens, 2023 - mdpi.com
Dengue fever has been a public health problem in the Caribbean region since 1981, when it
first reappeared in Cuba. In 1989, it was reported in Martinique and Guadeloupe (two …

A Practical Approach to Genome Assembly and Annotation of Basidiomycota Using the Example of Armillaria

DL Narh Mensah, BD Wingfield, MPA Coetzee - BioTechniques, 2023 - Taylor & Francis
Technological advancements in genome sequencing, assembly and annotation platforms
and algorithms that resulted in several genomic studies have created an opportunity to …

[HTML][HTML] Comparative Evaluation of Open-Source Bioinformatics Pipelines for Full-Length Viral Genome Assembly

L Zsichla, M Zeeb, D Fazekas, É Áy, D Müller… - Viruses, 2024 - mdpi.com
The increasingly widespread application of next-generation sequencing (NGS) in clinical
diagnostics and epidemiological research has generated a demand for robust, fast …

Ct Value from RT-qPCR Can Predict SARS-CoV-2 Virus Assembly and Lineage Assignment Success

D Hadzega, K Babisová, M Hyblová, N Janostiaková… - Applied Sciences, 2023 - mdpi.com
Featured Application The results of the study can be applied in choosing the correct RNA-
sequencing strategy for the purpose of SARS-CoV-2 genome assembly. Abstract During the …

Harnessing Genomic Surveillance to Characterize the Molecular Epidemiology and Uncover Antiviral Resistance Mechanisms of SARS-CoV-2

TL Hu - 2024 - search.proquest.com
Abstract SARS-CoV-2, the causative agent of COVID-19, has had a devastating impact,
resulting in over 7 million deaths worldwide. Like most viruses, SARS-CoV-2 has continued …

[PDF][PDF] Phylogenetic Investigations of Dengue 2019–2021 Outbreak in Guadeloupe and Martinique Caribbean Islands. Pathogens 2023, 12, 1182

M Garcia–Van Smévoorde, G Piorkowski, L Emboulé… - 2023 - researchgate.net
Dengue fever has been a public health problem in the Caribbean region since 1981, when it
first reappeared in Cuba. In 1989, it was reported in Martinique and Guadeloupe (two …

Phylogenetic investigations of dengue 2019-2021 outbreak in Guadeloupe and Martinique Caribbean islands.

MGV Smévoorde, G Piorkowski, L Emboulé… - 2023 - cabidigitallibrary.org
Dengue fever has been a public health problem in the Caribbean region since 1981, when it
first reappeared in Cuba. In 1989, it was reported in Martinique and Guadeloupe (two …