The circadian system in higher plants

SL Harmer - Annual review of plant biology, 2009 - annualreviews.org
The circadian clock regulates diverse aspects of plant growth and development and
promotes plant fitness. Molecular identification of clock components, primarily in …

Circadian clock genes universally control key agricultural traits

C Bendix, CM Marshall, FG Harmon - Molecular plant, 2015 - cell.com
Circadian clocks are endogenous timers that enable plants to synchronize biological
processes with daily and seasonal environmental conditions in order to allocate resources …

First Report of CRISPR/Cas9 Mediated DNA-Free Editing of 4CL and RVE7 Genes in Chickpea Protoplasts

S Badhan, AS Ball, N Mantri - International Journal of Molecular Sciences, 2021 - mdpi.com
The current genome editing system Clustered Regularly Interspaced Short Palindromic
Repeats Cas9 (CRISPR/Cas9) has already confirmed its proficiency, adaptability, and …

PlantPAN 2.0: an update of plant promoter analysis navigator for reconstructing transcriptional regulatory networks in plants

CN Chow, HQ Zheng, NY Wu, CH Chien… - Nucleic acids …, 2016 - academic.oup.com
Transcription factors (TFs) are sequence-specific DNA-binding proteins acting as critical
regulators of gene expression. The Plant P romoter A nalysis N avigator (PlantPAN; …

The MYB transcription factor superfamily of Arabidopsis: expression analysis and phylogenetic comparison with the rice MYB family

C Yanhui, Y Xiaoyuan, H Kun, L Meihua, L Jigang… - Plant molecular …, 2006 - Springer
MYB proteins are a superfamily of transcription factors that play regulatory roles in
developmental processes and defense responses in plants. We identified 198 genes in the …

Direct repression of evening genes by CIRCADIAN CLOCK-ASSOCIATED1 in the Arabidopsis circadian clock

M Kamioka, S Takao, T Suzuki, K Taki… - The Plant …, 2016 - academic.oup.com
The circadian clock is a biological timekeeping system that provides organisms with the
ability to adapt to day-night cycles. Timing of the expression of four members of the …

Global transcriptome analysis reveals circadian regulation of key pathways in plant growth and development

MF Covington, JN Maloof, M Straume, SA Kay… - Genome biology, 2008 - Springer
Background As nonmotile organisms, plants must rapidly adapt to ever-changing
environmental conditions, including those caused by daily light/dark cycles. One important …

Mapping and dynamics of regulatory DNA and transcription factor networks in A. thaliana

AM Sullivan, AA Arsovski, J Lempe, KL Bubb… - Cell reports, 2014 - cell.com
Our understanding of gene regulation in plants is constrained by our limited knowledge of
plant cis-regulatory DNA and its dynamics. We mapped DNase I hypersensitive sites (DHSs) …

Transcriptional repressor PRR5 directly regulates clock-output pathways

N Nakamichi, T Kiba, M Kamioka… - Proceedings of the …, 2012 - National Acad Sciences
The circadian clock is an endogenous time-keeping mechanism that enables organisms to
adapt to external daily cycles. The clock coordinates biological activities with these cycles …

LUX ARRHYTHMO encodes a Myb domain protein essential for circadian rhythms

SP Hazen, TF Schultz… - Proceedings of the …, 2005 - National Acad Sciences
In higher plants, the circadian clock orchestrates fundamental processes such as light
signaling and the transition to flowering. We isolated mutants of the circadian clock from an …