Control of cell cycle transcription during G1 and S phases

C Bertoli, JM Skotheim, RAM De Bruin - Nature reviews Molecular cell …, 2013 - nature.com
The accurate transition from G1 phase of the cell cycle to S phase is crucial for the control of
eukaryotic cell proliferation, and its misregulation promotes oncogenesis. During G1 phase …

Emerging roles of E2Fs in cancer: an exit from cell cycle control

HZ Chen, SY Tsai, G Leone - Nature reviews cancer, 2009 - nature.com
Mutations of the retinoblastoma tumour suppressor gene (RB1) or components regulating
the RB pathway have been identified in almost every human malignancy. The E2F …

Domain organization of human chromosomes revealed by mapping of nuclear lamina interactions

L Guelen, L Pagie, E Brasset, W Meuleman, MB Faza… - Nature, 2008 - nature.com
The architecture of human chromosomes in interphase nuclei is still largely unknown.
Microscopy studies have indicated that specific regions of chromosomes are located in close …

[HTML][HTML] A Myc network accounts for similarities between embryonic stem and cancer cell transcription programs

J Kim, AJ Woo, J Chu, JW Snow, Y Fujiwara, CG Kim… - Cell, 2010 - cell.com
Summary c-Myc (Myc) is an important transcriptional regulator in embryonic stem (ES) cells,
somatic cell reprogramming, and cancer. Here, we identify a Myc-centered regulatory …

A quartet of PIF bHLH factors provides a transcriptionally centered signaling hub that regulates seedling morphogenesis through differential expression-patterning of …

Y Zhang, O Mayba, A Pfeiffer, H Shi… - PLoS …, 2013 - journals.plos.org
Dark-grown seedlings exhibit skotomorphogenic development. Genetic and molecular
evidence indicates that a quartet of Arabidopsis Phytochrome (phy)-Interacting bHLH …

Insights from genomic profiling of transcription factors

PJ Farnham - Nature Reviews Genetics, 2009 - nature.com
A crucial question in the field of gene regulation is whether the location at which a
transcription factor binds influences its effectiveness or the mechanism by which it regulates …

Inhibition of pluripotency networks by the Rb tumor suppressor restricts reprogramming and tumorigenesis

MS Kareta, LL Gorges, S Hafeez, BA Benayoun… - Cell stem cell, 2015 - cell.com
Mutations in the retinoblastoma tumor suppressor gene Rb are involved in many forms of
human cancer. In this study, we investigated the early consequences of inactivating Rb in …

Senescence is an endogenous trigger for microRNA-directed transcriptional gene silencing in human cells

M Benhamed, U Herbig, T Ye, A Dejean, O Bischof - Nature cell biology, 2012 - nature.com
Cellular senescence is a tumour-suppressor mechanism that is triggered by cancer-initiating
or promoting events in mammalian cells. The molecular underpinnings for this stable arrest …

The functional consequences of variation in transcription factor binding

DA Cusanovich, B Pavlovic, JK Pritchard, Y Gilad - PLoS genetics, 2014 - journals.plos.org
One goal of human genetics is to understand how the information for precise and dynamic
gene expression programs is encoded in the genome. The interactions of transcription …

The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line

Nature genetics, 2009 - nature.com
Using deep sequencing (deepCAGE), the FANTOM4 study measured the genome-wide
dynamics of transcription-start-site usage in the human monocytic cell line THP-1 throughout …