High-pressure fluorescence applications

M Dellarole, CA Royer - Fluorescence Spectroscopy and Microscopy …, 2014 - Springer
Fluorescence is the most widely used technique to study the effect of pressure on
biochemical systems. The use of pressure as a physical variable sheds light into volumetric …

Protein Denaturation on p-T Axes – Thermodynamics and Analysis

L Smeller - … Pressure Bioscience: Basic Concepts, Applications and …, 2015 - Springer
Proteins are essential players in the vast majority of molecular level life processes. Since
their structure is in most cases substantial for their correct function, study of their structural …

Pressure and temperature stability of the main apple allergen Mal d1

J Somkuti, M Houska, L Smeller - European Biophysics Journal, 2011 - Springer
High-pressure Fourier-transform infrared (FTIR) spectroscopy was used to determine the
pressure and temperature stability of Mal d1. This study was triggered by contradictory …

Volume of Hsp90 ligand binding and the unfolding phase diagram as a function of pressure and temperature

V Petrauskas, J Gylytė, Z Toleikis… - European Biophysics …, 2013 - Springer
Volume changes that accompany protein unfolding and ligand binding are important but
largely neglected thermodynamic parameters that may facilitate rational drug design. Here …

Unraveling the mechanical unfolding pathways of a multidomain protein: phosphoglycerate kinase

Q Li, ZN Scholl, PE Marszalek - Biophysical Journal, 2018 - cell.com
Phosphoglycerate kinase (PGK) is a highly conserved enzyme that is crucial for glycolysis.
PGK is a monomeric protein composed of two similar domains and has been the focus of …

A tale of two desolvation potentials: An investigation of protein behavior under high hydrostatic pressure

AG Gasic, MS Cheung - The Journal of Physical Chemistry B, 2020 - ACS Publications
Hydrostatic pressure is a common perturbation to probe the conformations of proteins. There
are two common forms of pressure-dependent potentials of mean force (PMFs) derived from …

Theoretical analysis of high-pressure effects on conformational equilibria

J Spooner, H Wiebe, M Louwerse… - Canadian Journal of …, 2018 - cdnsciencepub.com
Along with temperature, pressure is the most important physical parameter determining the
thermodynamic properties and reactivity of chemical systems. In this work, we discuss the …

Theoretical volume profiles as a tool for probing transition states: Folding kinetics

H Wiebe, N Weinberg - The Journal of Chemical Physics, 2014 - pubs.aip.org
The mechanism by which conformational changes, particularly folding and unfolding, occur
in proteins and other biopolymers has been widely discussed in the literature. Molecular …

Molecular dynamics calculations of partial molar volumes of amino acids in aqueous solutions

Z Sentell, J Penner, J Spooner… - Canadian Journal of …, 2022 - cdnsciencepub.com
Partial molar volumes of amino acids in their zwitterionic and molecular forms were
calculated using molecular dynamics simulations of these systems in aqueous solutions …

Phase Phenomena of Proteins in Living Matter

AG Gasic - 2020 - uh-ir.tdl.org
Proteins must fold and function in the immensely complex environment of a cell, ie the
cytoplasm—this is far from the ideal test-tube setting of a dilute solution. Here, this thesis …