Constraining the metabolic genotype–phenotype relationship using a phylogeny of in silico methods
Reconstructed microbial metabolic networks facilitate a mechanistic description of the
genotype–phenotype relationship through the deployment of constraint-based …
genotype–phenotype relationship through the deployment of constraint-based …
Towards continuous industrial bioprocessing with solventogenic and acetogenic clostridia: challenges, progress and perspectives
CA Vees, CS Neuendorf, S Pflügl - Journal of Industrial …, 2020 - academic.oup.com
The sustainable production of solvents from above ground carbon is highly desired. Several
clostridia naturally produce solvents and use a variety of renewable and waste-derived …
clostridia naturally produce solvents and use a variety of renewable and waste-derived …
The ModelSEED Biochemistry Database for the integration of metabolic annotations and the reconstruction, comparison and analysis of metabolic models for plants …
For over 10 years, ModelSEED has been a primary resource for the construction of draft
genome-scale metabolic models based on annotated microbial or plant genomes. Now …
genome-scale metabolic models based on annotated microbial or plant genomes. Now …
BacArena: Individual-based metabolic modeling of heterogeneous microbes in complex communities
Recent advances focusing on the metabolic interactions within and between cellular
populations have emphasized the importance of microbial communities for human health …
populations have emphasized the importance of microbial communities for human health …
Optimizing genome-scale network reconstructions
Optimizing genome-scale network reconstructions | Nature Biotechnology Skip to main content
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Thank you for visiting nature.com. You are using a browser version with limited support for …
Multiscale computational models of complex biological systems
Integration of data across spatial, temporal, and functional scales is a primary focus of
biomedical engineering efforts. The advent of powerful computing platforms, coupled with …
biomedical engineering efforts. The advent of powerful computing platforms, coupled with …
Microbial synthesis of n-butanol, isobutanol, and other higher alcohols from diverse resources
Microbial production of fuel and chemical feedstock is a promising approach to solving
energy and environmental problems. n-Butanol, isobutanol and other higher alcohols are of …
energy and environmental problems. n-Butanol, isobutanol and other higher alcohols are of …
[HTML][HTML] Cashew apple bagasse as new feedstock for the hydrogen production using dark fermentation process
Cashew apple bagasse (CAB) has been studied as feedstock for the biohydrogen
production using Clostridium roseum and the dark fermentation process. Pretreatment with …
production using Clostridium roseum and the dark fermentation process. Pretreatment with …
Characterizing acetogenic metabolism using a genome-scale metabolic reconstruction of Clostridium ljungdahlii
Background The metabolic capabilities of acetogens to ferment a wide range of sugars, to
grow autotrophically on H 2/CO 2, and more importantly on synthesis gas (H 2/CO/CO 2) …
grow autotrophically on H 2/CO 2, and more importantly on synthesis gas (H 2/CO/CO 2) …
Arginine deiminase pathway provides ATP and boosts growth of the gas-fermenting acetogen Clostridium autoethanogenum
Acetogens are attractive organisms for the production of chemicals and fuels from
inexpensive and non-food feedstocks such as syngas (CO, CO 2 and H 2). Expanding their …
inexpensive and non-food feedstocks such as syngas (CO, CO 2 and H 2). Expanding their …