Species in lichen-forming fungi: balancing between conceptual and practical considerations, and between phenotype and phylogenomics

R Lücking, SD Leavitt, DL Hawksworth - Fungal Diversity, 2021 - Springer
Lichens are symbiotic associations resulting from interactions among fungi (primary and
secondary mycobionts), algae and/or cyanobacteria (primary and secondary photobionts) …

The integrative future of taxonomy

JM Padial, A Miralles, I De la Riva, M Vences - Frontiers in zoology, 2010 - Springer
Background Taxonomy is the biological discipline that identifies, describes, classifies and
names extant and extinct species and other taxa. Nowadays, species taxonomy is …

Unambiguous identification of fungi: where do we stand and how accurate and precise is fungal DNA barcoding?

R Lücking, MC Aime, B Robbertse, AN Miller… - IMA fungus, 2020 - Springer
True fungi (Fungi) and fungus-like organisms (eg Mycetozoa, Oomycota) constitute the
second largest group of organisms based on global richness estimates, with around 3 …

[图书][B] Environmental DNA: For biodiversity research and monitoring

P Taberlet, A Bonin, L Zinger, E Coissac - 2018 - books.google.com
Environmental DNA (eDNA) refers to DNA that can be extracted from environmental
samples (such as soil, water, feces, or air) without the prior isolation of any target organism …

Multi-rate Poisson tree processes for single-locus species delimitation under maximum likelihood and Markov chain Monte Carlo

P Kapli, S Lutteropp, J Zhang, K Kobert… - …, 2017 - academic.oup.com
Motivation In recent years, molecular species delimitation has become a routine approach
for quantifying and classifying biodiversity. Barcoding methods are of particular importance …

Insights into global diatom distribution and diversity in the world's ocean

S Malviya, E Scalco, S Audic… - Proceedings of the …, 2016 - National Acad Sciences
Diatoms (Bacillariophyta) constitute one of the most diverse and ecologically important
groups of phytoplankton. They are considered to be particularly important in nutrient-rich …

Comparison of methods for molecular species delimitation across a range of speciation scenarios

A Luo, C Ling, SYW Ho, CD Zhu - Systematic Biology, 2018 - academic.oup.com
Species are fundamental units in biological research and can be defined on the basis of
various operational criteria. There has been growing use of molecular approaches for …

Towards next‐generation biodiversity assessment using DNA metabarcoding

P Taberlet, E Coissac, F Pompanon… - Molecular …, 2012 - Wiley Online Library
Virtually all empirical ecological studies require species identification during data collection.
DNA metabarcoding refers to the automated identification of multiple species from a single …

ABGD, Automatic Barcode Gap Discovery for primary species delimitation

N Puillandre, A Lambert, S Brouillet… - Molecular ecology, 2012 - Wiley Online Library
Within uncharacterized groups, DNA barcodes, short DNA sequences that are present in a
wide range of species, can be used to assign organisms into species. We propose an …

[图书][B] Biology and evolution of the mollusca, volume 1

WF Ponder, DR Lindberg, JM Ponder - 2019 - taylorfrancis.com
Molluscs comprise the second largest phylum of animals (after arthropods), occurring in
virtually all habitats. Some are commercially important, a few are pests and some carry …