Schrödinger's microbes: tools for distinguishing the living from the dead in microbial ecosystems

JB Emerson, RI Adams, CMB Román, B Brooks… - Microbiome, 2017 - Springer
While often obvious for macroscopic organisms, determining whether a microbe is dead or
alive is fraught with complications. Fields such as microbial ecology, environmental health …

Microbial degradation of chloroethenes: a review

I Dolinová, M Štrojsová, M Černík, J Němeček… - … Science and Pollution …, 2017 - Springer
Contamination by chloroethenes has a severe negative effect on both the environment and
human health. This has prompted intensive remediation activity in recent years, along with …

Wastewater SARS-CoV-2 monitoring as a community-level COVID-19 trend tracker and variants in Ohio, United States

Y Ai, A Davis, D Jones, S Lemeshow, H Tu, F He… - Science of The Total …, 2021 - Elsevier
The global pandemic caused by severe acute respiratory syndrome coronavirus 2 (SARS-
CoV-2) has resulted in more than 129 million confirm cases. Many health authorities around …

Quantitative PCR Targeting 16S rRNA and Reductive Dehalogenase Genes Simultaneously Monitors Multiple Dehalococcoides Strains

KM Ritalahti, BK Amos, Y Sung, Q Wu… - Applied and …, 2006 - Am Soc Microbiol
The 16S rRNA gene provides insufficient information to infer the range of chloroorganic
electron acceptors used by different Dehalococcoides organisms. To overcome this …

Denitrification versus respiratory ammonification: environmental controls of two competing dissimilatory NO3/NO2 reduction pathways in Shewanella loihica …

S Yoon, C Cruz-García, R Sanford… - The ISME …, 2015 - academic.oup.com
Denitrification and respiratory ammonification are two competing, energy-conserving
NO3−/NO2− reduction pathways that have major biogeochemical consequences for N …

Microbial reductive debromination of polybrominated diphenyl ethers (PBDEs)

J He, KR Robrock, L Alvarez-Cohen - Environmental science & …, 2006 - ACS Publications
Polybrominated diphenyl ethers (PBDEs) are a class of widely used flame retardants that
have recently been detected in environmental samples, diverse biota, human blood serum …

Nitrous oxide reduction by an obligate aerobic bacterium, Gemmatimonas aurantiaca strain T-27

D Park, H Kim, S Yoon - Applied and Environmental Microbiology, 2017 - Am Soc Microbiol
ABSTRACT N2O-reducing organisms with nitrous oxide reductases (NosZ) are known as
the only biological sink of N2O in the environment. Among the most abundant nosZ genes …

Wastewater surveillance of SARS-CoV-2 in dormitories as a part of comprehensive university campus COVID-19 monitoring

E Lu, Y Ai, A Davis, J Straathof, K Halloran, N Hull… - Environmental …, 2022 - Elsevier
Wastewater-based epidemiology is an effective tool for monitoring infectious disease spread
or illicit drug use within communities. At the Ohio State University, we conducted a SARS …

Fluorescent probes for live-cell RNA detection

G Bao, WJ Rhee, A Tsourkas - Annual review of biomedical …, 2009 - annualreviews.org
Commonly used techniques for analyzing gene expression, such as polymerase chain
reaction (PCR), microarrays, and in situ hybridization, have proven invaluable in …

Resilience of organohalide-detoxifying microbial community to oxygen stress in sewage sludge

G Xu, J He - Water Research, 2022 - Elsevier
Organohalide pollutants are prevalent in the environment, causing harms to wildlife and
human. Organohalide-respiring bacteria (OHRB) could detoxify these pollutants in …