Genetic redundancy fuels polygenic adaptation in Drosophila

N Barghi, R Tobler, V Nolte, AM Jakšić, F Mallard… - PLoS …, 2019 - journals.plos.org
The genetic architecture of adaptive traits is of key importance to predict evolutionary
responses. Most adaptive traits are polygenic—ie, result from selection on a large number of …

Assembly of the threespine stickleback Y chromosome reveals convergent signatures of sex chromosome evolution

CL Peichel, SR McCann, JA Ross, AFS Naftaly… - Genome biology, 2020 - Springer
Background Heteromorphic sex chromosomes have evolved repeatedly across diverse
species. Suppression of recombination between X and Y chromosomes leads to …

The genomic distribution of transposable elements is driven by spatially variable purifying selection

AM Langmüller, V Nolte, M Dolezal… - Nucleic Acids …, 2023 - academic.oup.com
It is widely accepted that the genomic distribution of transposable elements (TEs) mainly
reflects the outcome of purifying selection and insertion bias. Nevertheless, the relative …

Heterochromatin-Enriched Assemblies Reveal the Sequence and Organization of the Drosophila melanogaster Y Chromosome

CH Chang, AM Larracuente - Genetics, 2019 - academic.oup.com
Heterochromatic repeat-rich regions are often missing from even the best genome
assemblies. Chang and Larracuente designed a de novo assembly strategy to improve the …

Evolution of genome structure in the Drosophila simulans species complex

M Chakraborty, CH Chang, DE Khost… - Genome …, 2021 - genome.cshlp.org
The rapid evolution of repetitive DNA sequences, including satellite DNA, tandem
duplications, and transposable elements, underlies phenotypic evolution and contributes to …

Searching for signatures of sexually antagonistic selection on stickleback sex chromosomes

AJ Dagilis, JM Sardell… - … of the Royal …, 2022 - royalsocietypublishing.org
Intralocus sexually antagonistic selection occurs when an allele is beneficial to one sex but
detrimental to the other. This form of selection is thought to be key to the evolution of sex …

Unique structure and positive selection promote the rapid divergence of Drosophila Y chromosomes

CH Chang, LE Gregory, KE Gordon, CD Meiklejohn… - Elife, 2022 - elifesciences.org
Y chromosomes across diverse species convergently evolve a gene-poor, heterochromatic
organization enriched for duplicated genes, LTR retrotransposons, and satellite DNA …

Extreme Y chromosome polymorphism corresponds to five male reproductive morphs of a freshwater fish

BA Sandkam, P Almeida, I Darolti… - Nature Ecology & …, 2021 - nature.com
Loss of recombination between sex chromosomes often depletes Y chromosomes of
functional content and genetic variation, which might limit their potential to generate …

Evolution of the sex-determining region in Ginkgo biloba

W Gong, DA Filatov - … Transactions of the Royal Society B, 2022 - royalsocietypublishing.org
Sex chromosomes or sex-determining regions (SDR) have been discovered in many
dioecious plant species, including the iconic 'living fossil'Ginkgo biloba, though the location …

The genetic architecture of temperature adaptation is shaped by population ancestry and not by selection regime

KA Otte, V Nolte, F Mallard, C Schlötterer - Genome Biology, 2021 - Springer
Background Understanding the genetic architecture of temperature adaptation is key for
characterizing and predicting the effect of climate change on natural populations. One …