The expanding world of small RNAs in plants

F Borges, RA Martienssen - Nature reviews Molecular cell biology, 2015 - nature.com
Plant genomes encode various small RNAs that function in distinct, yet overlapping, genetic
and epigenetic silencing pathways. However, the abundance and diversity of small-RNA …

Transgenerational epigenetic inheritance: myths and mechanisms

E Heard, RA Martienssen - Cell, 2014 - cell.com
Since the human genome was sequenced, the term" epigenetics" is increasingly being
associated with the hope that we are more than just the sum of our genes. Might what we …

RNA-directed DNA methylation: an epigenetic pathway of increasing complexity

MA Matzke, RA Mosher - Nature Reviews Genetics, 2014 - nature.com
RNA-directed DNA methylation (RdDM) is the major small RNA-mediated epigenetic
pathway in plants. RdDM requires a specialized transcriptional machinery that comprises …

Evolution of plant genome architecture

JF Wendel, SA Jackson, BC Meyers, RA Wing - Genome biology, 2016 - Springer
We have witnessed an explosion in our understanding of the evolution and structure of plant
genomes in recent years. Here, we highlight three important emergent realizations:(1) that …

Classification and comparison of small RNAs from plants

MJ Axtell - Annual review of plant biology, 2013 - annualreviews.org
Regulatory small RNAs, which range in size from 20 to 24 nucleotides, are ubiquitous
components of endogenous plant transcriptomes, as well as common responses to …

Establishing, maintaining and modifying DNA methylation patterns in plants and animals

JA Law, SE Jacobsen - Nature Reviews Genetics, 2010 - nature.com
Cytosine DNA methylation is a stable epigenetic mark that is crucial for diverse biological
processes, including gene and transposon silencing, imprinting and X chromosome …

Epigenetic reprogramming in plant and animal development

S Feng, SE Jacobsen, W Reik - Science, 2010 - science.org
Epigenetic modifications of the genome are generally stable in somatic cells of multicellular
organisms. In germ cells and early embryos, however, epigenetic reprogramming occurs on …

An updated overview on the regulation of seed germination

G Carrera-Castaño, J Calleja-Cabrera, M Pernas… - Plants, 2020 - mdpi.com
The ability of a seed to germinate and establish a plant at the right time of year is of vital
importance from an ecological and economical point of view. Due to the fragility of these …

Genomic and epigenetic insights into the molecular bases of heterosis

ZJ Chen - Nature Reviews Genetics, 2013 - nature.com
Heterosis, also known as hybrid vigour, is widespread in plants and animals, but the
molecular bases for this phenomenon remain elusive. Recent studies in hybrids and …

[HTML][HTML] Reprogramming of DNA methylation in pollen guides epigenetic inheritance via small RNA

JP Calarco, F Borges, MTA Donoghue, F Van Ex… - Cell, 2012 - cell.com
Epigenetic inheritance is more widespread in plants than in mammals, in part because
mammals erase epigenetic information by germline reprogramming. We sequenced the …