Complexity of the alternative splicing landscape in plants

ASN Reddy, Y Marquez, M Kalyna, A Barta - The Plant Cell, 2013 - academic.oup.com
Alternative splicing (AS) of precursor mRNAs (pre-mRNAs) from multiexon genes allows
organisms to increase their coding potential and regulate gene expression through multiple …

The molecular biology of meiosis in plants

R Mercier, C Mézard, E Jenczewski… - Annual review of …, 2015 - annualreviews.org
Meiosis is the cell division that reshuffles genetic information between generations.
Recently, much progress has been made in understanding this process; in particular, the …

[HTML][HTML] Alternative splicing in plants–coming of age

NH Syed, M Kalyna, Y Marquez, A Barta… - Trends in plant …, 2012 - cell.com
More than 60% of intron-containing genes undergo alternative splicing (AS) in plants. This
number will increase when AS in different tissues, developmental stages, and environmental …

Alternative splicing and nonsense-mediated decay modulate expression of important regulatory genes in Arabidopsis

M Kalyna, CG Simpson, NH Syed… - Nucleic acids …, 2012 - academic.oup.com
Alternative splicing (AS) coupled to nonsense-mediated decay (NMD) is a post-
transcriptional mechanism for regulating gene expression. We have used a high-resolution …

Nonsense-Mediated Decay of Alternative Precursor mRNA Splicing Variants Is a Major Determinant of the Arabidopsis Steady State Transcriptome

G Drechsel, A Kahles, AK Kesarwani, E Stauffer… - The Plant …, 2013 - academic.oup.com
The nonsense-mediated decay (NMD) surveillance pathway can recognize erroneous
transcripts and physiological mRNAs, such as precursor mRNA alternative splicing (AS) …

RNA homeostasis governed by cell type-specific and branched feedback loops acting on NMD

L Huang, CH Lou, W Chan, EY Shum, A Shao, E Stone… - Molecular cell, 2011 - cell.com
Nonsense-mediated mRNA decay (NMD) is a conserved RNA decay pathway that degrades
aberrant mRNAs and directly regulates many normal mRNAs. This dual role for NMD raises …

Nonsense-mediated mRNA decay effectors are essential for zebrafish embryonic development and survival

N Wittkopp, E Huntzinger, C Weiler… - … and Cellular Biology, 2009 - Am Soc Microbiol
The nonsense-mediated mRNA decay (NMD) pathway promotes rapid degradation of
mRNAs containing premature translation termination codons (PTCs or nonsense codons) …

Nonsense-mediated mRNA decay modulates immune receptor levels to regulate plant antibacterial defense

J Gloggnitzer, S Akimcheva, A Srinivasan, B Kusenda… - Cell host & …, 2014 - cell.com
Nonsense-mediated mRNA decay (NMD) is a conserved eukaryotic RNA surveillance
mechanism that degrades aberrant mRNAs. NMD impairment in Arabidopsis is linked to …

Proteomic analysis reveals O-GlcNAc modification on proteins with key regulatory functions in Arabidopsis

SL Xu, RJ Chalkley, JC Maynard… - Proceedings of the …, 2017 - National Acad Sciences
Genetic studies have shown essential functions of O-linked N-acetylglucosamine (O-
GlcNAc) modification in plants. However, the proteins and sites subject to this …

Meiotic exit in Arabidopsis is driven by P-body–mediated inhibition of translation

A Cairo, A Vargova, N Shukla, C Capitao, P Mikulkova… - Science, 2022 - science.org
Meiosis, at the transition between diploid and haploid life cycle phases, is accompanied by
reprograming of cell division machinery and followed by a transition back to mitosis. We …