Peptide-based vaccine for cancer therapies

L Buonaguro, M Tagliamonte - Frontiers in Immunology, 2023 - frontiersin.org
Different strategies based on peptides are available for cancer treatment, in particular to
counter-act the progression of tumor growth and disease relapse. In the last decade, in the …

HLA-binding properties of tumor neoepitopes in humans

EF Fritsch, M Rajasagi, PA Ott, V Brusic… - Cancer immunology …, 2014 - AACR
Cancer genome sequencing has enabled the rapid identification of the complete repertoire
of coding sequence mutations within a patient's tumor and facilitated their use as …

Mass spectrometry of human leukocyte antigen class I peptidomes reveals strong effects of protein abundance and turnover on antigen presentation*[S]

M Bassani-Sternberg, S Pletscher-Frankild… - Molecular & Cellular …, 2015 - ASBMB
HLA class I molecules reflect the health state of cells to cytotoxic T cells by presenting a
repertoire of endogenously derived peptides. However, the extent to which the proteome …

Systematic identification of personal tumor-specific neoantigens in chronic lymphocytic leukemia

M Rajasagi, SA Shukla, EF Fritsch… - Blood, The Journal …, 2014 - ashpublications.org
Genome sequencing has revealed a large number of shared and personal somatic
mutations across human cancers. In principle, any genetic alteration affecting a protein …

Immune epitope database analysis resource

Y Kim, J Ponomarenko, Z Zhu, D Tamang… - Nucleic acids …, 2012 - academic.oup.com
The immune epitope database analysis resource (IEDB-AR: http://tools. iedb. org) is a
collection of tools for prediction and analysis of molecular targets of T-and B-cell immune …

The length distribution of class I–restricted T cell epitopes is determined by both peptide supply and MHC allele–specific binding preference

T Trolle, CP McMurtrey, J Sidney, W Bardet… - The Journal of …, 2016 - journals.aai.org
HLA class I–binding predictions are widely used to identify candidate peptide targets of
human CD8+ T cell responses. Many such approaches focus exclusively on a limited range …

Systematically benchmarking peptide-MHC binding predictors: From synthetic to naturally processed epitopes

W Zhao, X Sher - PLoS computational biology, 2018 - journals.plos.org
A number of machine learning-based predictors have been developed for identifying
immunogenic T-cell epitopes based on major histocompatibility complex (MHC) class I and II …

Immunotherapy advances for glioblastoma

DA Reardon, G Freeman, C Wu, EA Chiocca… - Neuro …, 2014 - academic.oup.com
Survival for patients with glioblastoma, the most common high-grade primary CNS tumor,
remains poor despite multiple therapeutic interventions including intensifying cytotoxic …

Mass spectrometry-based antigen discovery for cancer immunotherapy

M Bassani-Sternberg, G Coukos - Current opinion in immunology, 2016 - Elsevier
Highlights•Immunopeptidomics analysis reveals the in vivo antigenic repertoire of
tumors.•Shared cancer antigens and private neo-epitopes are detected by …

Getting personal with neoantigen-based therapeutic cancer vaccines

N Hacohen, EF Fritsch, TA Carter, ES Lander… - Cancer immunology …, 2013 - AACR
Despite years of preclinical efforts and hundreds of clinical studies, therapeutic cancer
vaccines with the routine ability to limit or eliminate tumor growth in humans have been …