Dynamic protein interaction networks and new structural paradigms in signaling

V Csizmok, AV Follis, RW Kriwacki… - Chemical …, 2016 - ACS Publications
Understanding signaling and other complex biological processes requires elucidating the
critical roles of intrinsically disordered proteins (IDPs) and regions (IDRs), which represent∼ …

Physics of the nuclear pore complex: Theory, modeling and experiment

BW Hoogenboom, LE Hough, EA Lemke, RYH Lim… - Physics reports, 2021 - Elsevier
The hallmark of eukaryotic cells is the nucleus that contains the genome, enclosed by a
physical barrier known as the nuclear envelope (NE). On the one hand, this …

Nucleoporin NUP153 phenylalanine-glycine motifs engage a common binding pocket within the HIV-1 capsid protein to mediate lentiviral infectivity

KA Matreyek, SS Yücel, X Li, A Engelman - PLoS pathogens, 2013 - journals.plos.org
Lentiviruses can infect non-dividing cells, and various cellular transport proteins provide
crucial functions for lentiviral nuclear entry and integration. We previously showed that the …

Spatiotemporal dynamics of the nuclear pore complex transport barrier resolved by high-speed atomic force microscopy

Y Sakiyama, A Mazur, LE Kapinos, RYH Lim - Nature nanotechnology, 2016 - nature.com
Nuclear pore complexes (NPCs) are biological nanomachines that mediate the bidirectional
traffic of macromolecules between the cytoplasm and nucleus in eukaryotic cells. This …

A lipid bound actin meshwork organizes liquid phase separation in model membranes

A Honigmann, S Sadeghi, K Jan, SW Hell, C Eggeling… - Biophysical …, 2014 - cell.com
The cytoplasmic side of eukaryotic cell membranes is covered by a dense actin rich cortex.
We present FCS and STED experiments showing that a dense membrane bound actin …

Viral and cellular requirements for the nuclear entry of retroviral preintegration nucleoprotein complexes

KA Matreyek, A Engelman - Viruses, 2013 - mdpi.com
Retroviruses integrate their reverse transcribed genomes into host cell chromosomes as an
obligate step in virus replication. The nuclear envelope separates the chromosomes from …

[HTML][HTML] Recent applications of fluorescence correlation spectroscopy in live systems

R Macháň, T Wohland - FEBS letters, 2014 - Elsevier
Fluorescence correlation spectroscopy (FCS) is a widely used technique in biophysics and
has helped address many questions in the life sciences. It provides important advantages …

Disordered proteinaceous machines

M Fuxreiter, A Tóth-Petróczy, DA Kraut… - Chemical …, 2014 - ACS Publications
Many full-length proteins and protein regions lack stable tertiary and/or secondary structure
under physiological conditions in vitro. These proteins and regions, known as intrinsically …

Progress and perspectives in single-molecule optical spectroscopy

S Adhikari, M Orrit - The Journal of Chemical Physics, 2022 - pubs.aip.org
We review some of the progress of single-molecule optical experiments in the past 20 years
and propose some perspectives for the coming years. We particularly focus on …

The selective permeability barrier in the nuclear pore complex

C Li, A Goryaynov, W Yang - Nucleus, 2016 - Taylor & Francis
The nuclear pore complex (NPC) mediates the shuttle transport of macromolecules between
the nucleus and cytoplasm in eukaryotic cells. The permeability barrier formed by …