[HTML][HTML] The new tree of eukaryotes

F Burki, AJ Roger, MW Brown, AGB Simpson - Trends in ecology & …, 2020 - cell.com
For 15 years, the eukaryote Tree of Life (eToL) has been divided into five to eight major
groupings, known as 'supergroups'. However, the tree has been profoundly rearranged …

[HTML][HTML] Past, present, and future perspectives of environmental DNA (eDNA) metabarcoding: A systematic review in methods, monitoring, and applications of global …

KM Ruppert, RJ Kline, MS Rahman - Global Ecology and Conservation, 2019 - Elsevier
Environmental DNA (eDNA) metabarcoding is a novel method of assessing biodiversity
wherein samples are taken from the environment via water, sediment or air from which DNA …

[HTML][HTML] The future of biotic indices in the ecogenomic era: Integrating (e) DNA metabarcoding in biological assessment of aquatic ecosystems

J Pawlowski, M Kelly-Quinn, F Altermatt… - Science of the Total …, 2018 - Elsevier
The bioassessment of aquatic ecosystems is currently based on various biotic indices that
use the occurrence and/or abundance of selected taxonomic groups to define ecological …

Euglenozoa: taxonomy, diversity and ecology, symbioses and viruses

AY Kostygov, A Karnkowska, J Votýpka… - Open …, 2021 - royalsocietypublishing.org
Euglenozoa is a species-rich group of protists, which have extremely diverse lifestyles and a
range of features that distinguish them from other eukaryotes. They are composed of free …

The host microbiome regulates and maintains human health: a primer and perspective for non-microbiologists

S Thomas, J Izard, E Walsh, K Batich… - Cancer research, 2017 - AACR
Humans consider themselves discrete autonomous organisms, but recent research is
rapidly strengthening the appreciation that associated microorganisms make essential …

The Mixoplankton Database (MDB): Diversity of photo‐phago‐trophic plankton in form, function, and distribution across the global ocean

A Mitra, DA Caron, E Faure, KJ Flynn… - Journal of Eukaryotic …, 2023 - Wiley Online Library
Protist plankton are major members of open‐water marine food webs. Traditionally divided
between phototrophic phytoplankton and phagotrophic zooplankton, recent research shows …

An online resource for marine fungi

EBG Jones, KL Pang, MA Abdel-Wahab, B Scholz… - Fungal Diversity, 2019 - Springer
Abstract Index Fungorum, Species Fungorum and MycoBank are the key fungal
nomenclature and taxonomic databases that can be sourced to find taxonomic details …

[HTML][HTML] DNA metabarcoding of littoral hard-bottom communities: high diversity and database gaps revealed by two molecular markers

OS Wangensteen, C Palacín, M Guardiola, X Turon - PeerJ, 2018 - peerj.com
Biodiversity assessment of marine hard-bottom communities is hindered by the high
diversity and size-ranges of the organisms present. We developed a DNA metabarcoding …

Parasites dominate hyperdiverse soil protist communities in Neotropical rainforests

F Mahé, C de Vargas, D Bass, L Czech… - Nature ecology & …, 2017 - nature.com
High animal and plant richness in tropical rainforest communities has long intrigued
naturalists. It is unknown if similar hyperdiversity patterns are reflected at the microbial scale …

Composition and spatial-temporal dynamics of phytoplankton community shaped by environmental selection and interactions in the Jiaozhou Bay

S Liu, Z Cui, Y Zhao, N Chen - Water Research, 2022 - Elsevier
Abstract The Jiaozhou Bay as a model marine ecosystem in China has been intensively
investigated over the last 90 years. However, detailed phytoplankton community …