Design of a high density SNP genotyping assay in the pig using SNPs identified and characterized by next generation sequencing technology

AM Ramos, RPMA Crooijmans, NA Affara, AJ Amaral… - PloS one, 2009 - journals.plos.org
Background The dissection of complex traits of economic importance to the pig industry
requires the availability of a significant number of genetic markers, such as single nucleotide …

Development and application of high-density SNP arrays in genomic studies of domestic animals

B Fan, ZQ Du, DM Gorbach… - … -Australasian journal of …, 2010 - koreascience.kr
In the past decade, there have been many advances in whole-genome sequencing in
domestic animals, as well as the development of" next-generation" sequencing technologies …

Genetic architecture and selection of Anhui autochthonous pig population revealed by whole genome resequencing

W Zhang, X Li, Y Jiang, M Zhou, L Liu, S Su, C Xu… - Frontiers in …, 2022 - frontiersin.org
The genetic resources among pigs in Anhui Province are diverse, but their value and
potential have yet to be discovered. To illustrate the genetic diversity and population …

Development of the catfish 250K SNP array for genome-wide association studies

S Liu, L Sun, Y Li, F Sun, Y Jiang, Y Zhang, J Zhang… - BMC research …, 2014 - Springer
Background Quantitative traits, such as disease resistance, are most often controlled by a
set of genes involving a complex array of regulation. The dissection of genetic basis of …

Identification of signatures of selection by whole-genome resequencing of a Chinese native pig

W Zhang, M Yang, M Zhou, Y Wang, X Wu… - Frontiers in …, 2020 - frontiersin.org
Identification of genomic signatures of selection that help reveal genetic mechanisms
underlying traits in domesticated pigs is of importance. Anqing six-end-white pig (ASP), a …

The role of gene discovery, QTL analyses and gene expression in reproductive traits in the pig

SK Onteru, JW Ross… - Soc. Reprod. Fertil.–2009 …, 2009 - books.google.com
The reproductive performance of the sow is one of the key factors affecting production
profitability of the pig industry. Reproductive traits are in general, lowly heritable, and with …

Genome sequencing and analysis of Mangalica, a fatty local pig of Hungary

J Molnár, T Nagy, V Stéger, G Tóth, F Marincs, E Barta - BMC genomics, 2014 - Springer
Background Mangalicas are fatty type local/rare pig breeds with an increasing presence in
the niche pork market in Hungary and in other countries. To explore their genetic resources …

Assessing population structure and signatures of selection in Wanbei pigs using whole genome resequencing data

W Zhang, L Liu, M Zhou, S Su, L Dong, X Meng, X Li… - Animals, 2022 - mdpi.com
Simple Summary The aim of this study was to perform whole-genome resequencing on
Wanbei pigs and combine its data with Asian wild boar sequencing data to assess their …

Application of massive parallel sequencing to whole genome SNP discovery in the porcine genome

AJ Amaral, HJ Megens, HHD Kerstens, HCM Heuven… - BMC genomics, 2009 - Springer
Abstract Background Although the Illumina 1 G Genome Analyzer generates billions of base
pairs of sequence data, challenges arise in sequence selection due to the varying sequence …

Genomic Diversity in Pig (Sus scrofa) and its Comparison with Human and other Livestock

C Zhang, G Plastow - Current genomics, 2011 - ingentaconnect.com
We have reviewed the current pig (Sus scrofa) genomic diversity within and between sites
and compared them with human and other livestock. The current Porcine 60K single …