A renaissance of neural networks in drug discovery

II Baskin, D Winkler, IV Tetko - Expert opinion on drug discovery, 2016 - Taylor & Francis
Introduction: Neural networks are becoming a very popular method for solving machine
learning and artificial intelligence problems. The variety of neural network types and their …

[PDF][PDF] Comprehensive strategies of machine-learning-based quantitative structure-activity relationship models

J Mao, J Akhtar, X Zhang, L Sun, S Guan, X Li, G Chen… - Iscience, 2021 - cell.com
Early quantitative structure-activity relationship (QSAR) technologies have unsatisfactory
versatility and accuracy in fields such as drug discovery because they are based on …

[HTML][HTML] Risk prediction for repeated measures health outcomes: A divide and recombine framework

RI Chowdhury, JH Tomal - Informatics in Medicine Unlocked, 2022 - Elsevier
We propose a machine learning framework for risk prediction for binary response sequence
observed over time, creating a trajectory for disease progression and regression. The …

EPX: An R package for the ensemble of subsets of variables for highly unbalanced binary classification

GG Hsu, JH Tomal, WJ Welch - Computers in Biology and Medicine, 2021 - Elsevier
Background and objective In binary classification problems with a rare class of interest, there
is relatively little information available for the rare class to build a model. On the other hand …

Multivariate statistical analysis of a large odorants database aimed at revealing similarities and links between odorants and odors

A Tromelin, C Chabanet, K Audouze… - Flavour and …, 2018 - Wiley Online Library
The perception of odor is an important component of smell; the first step of odor detection,
and the discrimination of structurally diverse odorants depends on their interactions with …

[HTML][HTML] Development and application of a comprehensive machine learning program for predicting molecular biochemical and pharmacological properties

H Choi, H Kang, KC Chung, H Park - Physical Chemistry Chemical …, 2019 - pubs.rsc.org
We establish a comprehensive quantitative structure–activity relationship (QSAR) model
termed AlphaQ through the machine learning algorithm to associate the fully quantum …

Robust ranking by ensembling of diverse models and assessment metrics

JH Tomal, WJ Welch, RH Zamar - Journal of Statistical …, 2023 - Taylor & Francis
We propose an ensemble of classification models formed using different assessment
metrics. For a given metric, a classifier performs feature selection and combines models …

In silico ligand‐based modeling of hBACE‐1 inhibitors

G Subramanian, G Poda - Chemical Biology & Drug Design, 2018 - Wiley Online Library
Alzheimer's disease is a chronic neurodegenerative disease affecting more than 30 million
people worldwide. Development of small molecule inhibitors of human β‐secretase 1 …

Linear and non-linear QSAR models on platinum (II) anticancer drugs with N-donor ligands

RSK Abadi, A Alizadehdakhel, F Moosapour - 2017 - nopr.niscpr.res.in
This research presents a quantitative structure-activity relationship (QSAR) of IC50 values of
Platinum (II) derivatives. Twenty one different platinum (II) anticancer derivatives have been …

[PDF][PDF] Informatics in Medicine Unlocked

RI Chowdhury, MB Islam, S Ahmad, MA Moni - researchgate.net
We propose a machine learning framework for risk prediction for binary response sequence
observed over time, creating a trajectory for disease progression and regression. The …