[HTML][HTML] GroEL/ES chaperonin modulates the mechanism and accelerates the rate of TIM-barrel domain folding

F Georgescauld, K Popova, AJ Gupta, A Bracher… - Cell, 2014 - cell.com
The GroEL/ES chaperonin system functions as a protein folding cage. Many obligate
substrates of GroEL share the (βα) 8 TIM-barrel fold, but how the chaperonin promotes …

Dihydrodipicolinate synthase: structure, dynamics, function, and evolution

F Grant Pearce, AO Hudson, K Loomes… - … : Structure and Function, 2017 - Springer
Enzymes are usually comprised of multiple subunits and more often than not they are made
up of identical subunits. In this review we examine lysine biosynthesis and focus on the …

Stochastic protein multimerization, activity, and fitness

K Hagner, S Setayeshgar, M Lynch - Physical Review E, 2018 - APS
Many proteins assemble into homomultimeric structures, with a number of subunits that can
vary substantially among phylogenetic lineages. As protein-protein interactions require …

Crystal, Solution and In silico Structural Studies of Dihydrodipicolinate Synthase from the Common Grapevine

SC Atkinson, C Dogovski, MT Downton, FG Pearce… - PLoS …, 2012 - journals.plos.org
Dihydrodipicolinate synthase (DHDPS) catalyzes the rate limiting step in lysine biosynthesis
in bacteria and plants. The structure of DHDPS has been determined from several bacterial …

From Knock-Out Phenotype to Three-Dimensional Structure of a Promising Antibiotic Target from Streptococcus pneumoniae

C Dogovski, MA Gorman, NE Ketaren, J Praszkier… - PLoS …, 2013 - journals.plos.org
Given the rise in drug-resistant Streptococcus pneumoniae, there is an urgent need to
discover new antimicrobials targeting this pathogen and an equally urgent need to …

Dihydrodipicolinate Synthase from Campylobacter jejuni: Kinetic Mechanism of Cooperative Allosteric Inhibition and Inhibitor-Induced Substrate Cooperativity

YV Skovpen, DRJ Palmer - Biochemistry, 2013 - ACS Publications
Dihydrodipicolinate synthase (DHDPS), an enzyme of the meso-diaminopimelate pathway
of lysine biosynthesis, is essential for bacterial growth and is considered a target for novel …

Comparison of untagged and his-tagged dihydrodipicolinate synthase from the enteric pathogen Vibrio cholerae

R Gupta, TPS da Costa, P Faou, C Dogovski… - Protein Expression and …, 2018 - Elsevier
Given the emergence of multi drug resistant Vibrio cholerae strains, there is an urgent need
to characterize new anti-cholera targets. One such target is the enzyme dihydrodipicolinate …

A metal ion–dependent conformational switch modulates activity of the Plasmodium M17 aminopeptidase

CT Webb, W Yang, BT Riley, BK Hayes… - Journal of Biological …, 2022 - ASBMB
The metal-dependent M17 aminopeptidases are conserved throughout all kingdoms of life.
This large enzyme family is characterized by a conserved binuclear metal center and a …

Destabilization of the homotetrameric assembly of 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase from the hyperthermophile Pyrococcus furiosus enhances …

AR Nazmi, LR Schofield, RCJ Dobson… - Journal of Molecular …, 2014 - Elsevier
Many proteins adopt homomeric quaternary structures to support their biological function,
including the first enzyme of the shikimate pathway that is ultimately responsible for the …

Dynamic Modelling Reveals 'Hotspots' on the Pathway to Enzyme-Substrate Complex Formation

SE Gordon, DK Weber, MT Downton… - PLoS computational …, 2016 - journals.plos.org
Dihydrodipicolinate synthase (DHDPS) catalyzes the first committed step in the
diaminopimelate pathway of bacteria, yielding amino acids required for cell wall and protein …