Genomic and phenotypic heterogeneity in prostate cancer

MC Haffner, W Zwart, MP Roudier, LD True… - Nature Reviews …, 2021 - nature.com
From a clinical, morphological and molecular perspective, prostate cancer is a
heterogeneous disease. Primary prostate cancers are often multifocal, having …

Advancing cancer research and medicine with single-cell genomics

B Lim, Y Lin, N Navin - Cancer cell, 2020 - cell.com
Single-cell sequencing (SCS) has impacted many areas of cancer research and improved
our understanding of intratumor heterogeneity, the tumor microenvironment, metastasis, and …

[HTML][HTML] Ordered and deterministic cancer genome evolution after p53 loss

T Baslan, JP Morris IV, Z Zhao, J Reyes, YJ Ho… - Nature, 2022 - nature.com
Although p53 inactivation promotes genomic instability and presents a route to malignancy
for more than half of all human cancers,, the patterns through which heterogenous TP53 …

Accurate genomic variant detection in single cells with primary template-directed amplification

V Gonzalez-Pena, S Natarajan, Y Xia… - Proceedings of the …, 2021 - National Acad Sciences
Improvements in whole genome amplification (WGA) would enable new types of basic and
applied biomedical research, including studies of intratissue genetic diversity that require …

Prostate zones and cancer: lost in transition?

A Ali, A Du Feu, P Oliveira, A Choudhury… - Nature Reviews …, 2022 - nature.com
Localized prostate cancer shows great clinical, genetic and environmental heterogeneity;
however, prostate cancer treatment is currently guided solely by clinical staging, serum PSA …

[HTML][HTML] Explainable artificial intelligence to predict and identify prostate cancer tissue by gene expression

A Ramírez-Mena, E Andrés-León… - Computer Methods and …, 2023 - Elsevier
Abstract Background and Objective: Prostate cancer is one of the most prevalent forms of
cancer in men worldwide. Traditional screening strategies such as serum PSA levels, which …

Novel insights into breast cancer copy number genetic heterogeneity revealed by single-cell genome sequencing

T Baslan, J Kendall, K Volyanskyy, K McNamara… - elife, 2020 - elifesciences.org
Copy number alterations (CNAs) play an important role in molding the genomes of breast
cancers and have been shown to be clinically useful for prognostic and therapeutic …

Dietary pro-oxidant therapy by a vitamin K precursor targets PI 3-kinase VPS34 function

MM Swamynathan, S Kuang, KE Watrud, MR Doherty… - Science, 2024 - science.org
Men taking antioxidant vitamin E supplements have increased prostate cancer (PC) risk.
However, whether pro-oxidants protect from PC remained unclear. In this work, we show that …

A systematic review of prostate cancer heterogeneity: understanding the clonal ancestry of multifocal disease

A Erickson, A Hayes, T Rajakumar, C Verrill… - European Urology …, 2021 - Elsevier
Context Studies characterising genomic changes in prostate cancer (PCa) during natural
progression have greatly increased our understanding of the disease. A better …

Single-cell applications of next-generation sequencing

N Anaparthy, YJ Ho… - Cold Spring …, 2019 - perspectivesinmedicine.cshlp.org
The single cell is considered the basic unit of biology, and the pursuit of understanding how
heterogeneous populations of cells can functionally coexist in tissues, organisms, microbial …