Computational Approaches for Identifying Neuropeptides: A Comprehensive Review

R Rahmani, LR Kalankesh, R Ferdousi - Molecular Therapy Nucleic Acids, 2024 - cell.com
Neuropeptides (NPs) are key signaling molecules that interact with G protein-coupled
receptors, influencing neuronal activities and developmental pathways, as well as the …

Principles and methods of in-silico prioritization of non-coding regulatory variants

PH Lee, C Lee, X Li, B Wee, T Dwivedi, M Daly - Human genetics, 2018 - Springer
Over a decade of genome-wide association, studies have made great strides toward the
detection of genes and genetic mechanisms underlying complex traits. However, the …

Expanded insights into mechanisms of gene expression and disease related disruptions

M Smith, PL Flodman - Frontiers in molecular biosciences, 2018 - frontiersin.org
Definitive molecular diagnoses in disorders apparently due to genetic or genomic defects
are still lacking in a significant number of investigated cases, despite use of studies …

[PDF][PDF] Computational characterization of Transcription End sites in Human Genome

S Menon - International Journal of All Research Education and …, 2021 - researchgate.net
The completion of the sequencing of the human, mouse, and other genomes has allowed
efforts to annotate these genomes extensively using a combination of computational and …

Classify Alzheimer genes association using Naïve Bayes algorithm

S Raj, A Vishnoi, A Srivastava - Human Gene, 2024 - Elsevier
Background Alzheimer's disease, the most common form of dementia, accounts for 60–80%
of cases and its prevalence is projected to increase as aging populations grow. By 2050, the …

Is blockchain the breakthrough we are looking for to facilitate genomic data sharing? The European Union perspective

F Cascini, F Beccia, FA Causio, A Gentili… - Digital …, 2022 - journals.sagepub.com
The recent progress of genomics research is providing unprecedented insight into human
genetic variance, susceptibility to disease and risk stratification. Current trends predict that a …

Identification and validation of novel Hedgehog-responsive enhancers predicted by computational analysis of Ci/Gli binding site density

K Gurdziel, DS Lorberbaum, AM Udager, JY Song… - PLoS …, 2015 - journals.plos.org
The Hedgehog (Hh) signaling pathway directs a multitude of cellular responses during
embryogenesis and adult tissue homeostasis. Stimulation of the pathway results in …

Atlas of regulated target genes of transcription factors (ART-TF) in human ES cells

AA Sharov, Y Nakatake, W Wang - BMC bioinformatics, 2022 - Springer
Abstract Background Transcription factors (TFs) play central roles in maintaining “stemness”
of embryonic stem (ES) cells and their differentiation into several hundreds of adult cell …

[HTML][HTML] Physiological role of genes involved in taurine biosynthesis in fishes and in silico approach to determine transcription factors in their promoters' zone

T Martínez-Burguete, ES Peña-Marín… - Latin american journal …, 2024 - SciELO Chile
Taurine, an amino sulfonic acid that is sometimes referred to as an amino acid, is
endogenously synthesized by the action of the key genes/enzymes: cysteine dioxygenase …

More than meets the eye: Emergent properties of transcription factors networks in Arabidopsis

D Muhammad, S Schmittling, C Williams… - Biochimica et Biophysica …, 2017 - Elsevier
Uncovering and mathematically modeling Transcription Factor Networks (TFNs) are the first
steps in engineering plants with traits that are better equipped to respond to changing …