Opportunities and obstacles for deep learning in biology and medicine

T Ching, DS Himmelstein… - Journal of the …, 2018 - royalsocietypublishing.org
Deep learning describes a class of machine learning algorithms that are capable of
combining raw inputs into layers of intermediate features. These algorithms have recently …

A transdisciplinary review of deep learning research and its relevance for water resources scientists

C Shen - Water Resources Research, 2018 - Wiley Online Library
Deep learning (DL), a new generation of artificial neural network research, has transformed
industries, daily lives, and various scientific disciplines in recent years. DL represents …

Applications of deep learning and reinforcement learning to biological data

M Mahmud, MS Kaiser, A Hussain… - IEEE transactions on …, 2018 - ieeexplore.ieee.org
Rapid advances in hardware-based technologies during the past decades have opened up
new possibilities for life scientists to gather multimodal data in various application domains …

Deep learning and its applications in biomedicine

C Cao, F Liu, H Tan, D Song, W Shu… - Genomics …, 2018 - academic.oup.com
Advances in biological and medical technologies have been providing us explosive
volumes of biological and physiological data, such as medical images …

BioSeq-Analysis2. 0: an updated platform for analyzing DNA, RNA and protein sequences at sequence level and residue level based on machine learning …

B Liu, X Gao, H Zhang - Nucleic acids research, 2019 - academic.oup.com
As the first web server to analyze various biological sequences at sequence level based on
machine learning approaches, many powerful predictors in the field of computational …

Deep learning in bioinformatics: Introduction, application, and perspective in the big data era

Y Li, C Huang, L Ding, Z Li, Y Pan, X Gao - Methods, 2019 - Elsevier
Deep learning, which is especially formidable in handling big data, has achieved great
success in various fields, including bioinformatics. With the advances of the big data era in …

Deep learning in bioinformatics

S Min, B Lee, S Yoon - Briefings in bioinformatics, 2017 - academic.oup.com
In the era of big data, transformation of biomedical big data into valuable knowledge has
been one of the most important challenges in bioinformatics. Deep learning has advanced …

Deep learning for computational chemistry

GB Goh, NO Hodas, A Vishnu - Journal of computational …, 2017 - Wiley Online Library
The rise and fall of artificial neural networks is well documented in the scientific literature of
both computer science and computational chemistry. Yet almost two decades later, we are …

[HTML][HTML] Deep learning methods in protein structure prediction

M Torrisi, G Pollastri, Q Le - Computational and Structural Biotechnology …, 2020 - Elsevier
Abstract Protein Structure Prediction is a central topic in Structural Bioinformatics. Since
the'60s statistical methods, followed by increasingly complex Machine Learning and recently …

Deep learning in drug discovery

E Gawehn, JA Hiss, G Schneider - Molecular informatics, 2016 - Wiley Online Library
Artificial neural networks had their first heyday in molecular informatics and drug discovery
approximately two decades ago. Currently, we are witnessing renewed interest in adapting …