Mathematical complexities in radionuclide metabolic modeling: a review of ordinary differential equation kinetics solvers in biokinetic modeling

EM Mate-Kole, SA Dewji - Journal of Radiological Protection, 2024 - iopscience.iop.org
Mathematical complexities in radionuclide metabolic modeling: A review of ordinary differential
equation kinetics solvers in bio Page 1 Journal of Radiological Protection ACCEPTED …

Bridging hpc communities through the julia programming language

V Churavy, WF Godoy, C Bauer, H Ranocha… - arXiv preprint arXiv …, 2022 - arxiv.org
The Julia programming language has evolved into a modern alternative to fill existing gaps
in scientific computing and data science applications. Julia leverages a unified and …

Fortran High-Level Synthesis: Reducing the barriers to accelerating HPC codes on FPGAs

G Rodriguez-Canal, N Brown, T Dykes… - … Conference on Field …, 2023 - ieeexplore.ieee.org
In recent years the use of FPGAs to accelerate scientific applications has grown, with
numerous applications demonstrating the benefit of FPGAs for high performance workloads …

[HTML][HTML] Developing performance portable plasma edge simulations: A survey

SA Wright, CP Ridgers, GR Mudalige, Z Lantra… - Computer Physics …, 2024 - Elsevier
Heterogeneous architectures are increasingly common in modern High-Performance
Computing (HPC) systems. Achieving high-performance on such heterogeneous systems …

An Automated Tool for Upgrading Fortran Codes

L Mak, P Taheri - Software, 2022 - mdpi.com
With archaic coding techniques, there will be a time when it will be necessary to modernize
vulnerable software. However, redeveloping out-of-date code can be a time-consuming task …

[PDF][PDF] Simple DFT-D3: Library first implementation of the D3 dispersion correction

S Ehlert - Journal of Open Source Software, 2024 - joss.theoj.org
The simulation of chemical reactions or processes provides a fundamental approach to
understanding chemistry. The application of Kohn-Sham density functional theory …

Caffeine: Coarray Fortran framework of efficient interfaces to network environments

D Rouson, D Bonachea - 2022 IEEE/ACM Eighth Workshop on …, 2022 - ieeexplore.ieee.org
This paper provides an introduction to the CoArray Fortran Framework of Efficient Interfaces
to Network Environments (Caffeine), a parallel runtime library built atop the GASNet-EX …

An evaluation of LLM code generation capabilities through graded exercises

ÁB Jiménez - arXiv preprint arXiv:2410.16292, 2024 - arxiv.org
Large Language Models have shown prominent capabilities in generating functional code
from natural language descriptions. However, a standardized way to evaluate these …

An evaluation of risks associated with relying on Fortran for mission critical codes for the next 15 years

GM Shipman, TC Randles - 2023 - osti.gov
This document examines risks associated with relying on Fortran for codes critical to nuclear
security into the late 2030s. The study was requested by the LANL ASC program office to …

PyPartMC: A Pythonic interface to a particle-resolved, Monte Carlo aerosol simulation framework

Z D'Aquino, S Arabas, JH Curtis, A Vaishnav, N Riemer… - SoftwareX, 2024 - Elsevier
PyPartMC is a Pythonic interface to PartMC, a stochastic, particle-resolved aerosol model
implemented in Fortran. Both PyPartMC and PartMC are free, libre, and open-source …