Wheat genomic study for genetic improvement of traits in China

J Xiao, B Liu, Y Yao, Z Guo, H Jia, L Kong… - Science China Life …, 2022 - Springer
Bread wheat (Triticum aestivum L.) is a major crop that feeds 40% of the world's population.
Over the past several decades, advances in genomics have led to tremendous …

Triticeae crop genome biology: an endless frontier

Z Gao, J Bian, F Lu, Y Jiao, H He - Frontiers in Plant Science, 2023 - frontiersin.org
Triticeae, the wheatgrass tribe, includes several major cereal crops and their wild relatives.
Major crops within the Triticeae are wheat, barley and rye which are important for human …

Pangenome analysis reveals genomic variations associated with domestication traits in broomcorn millet

J Chen, Y Liu, M Liu, W Guo, Y Wang, Q He, W Chen… - Nature Genetics, 2023 - nature.com
Broomcorn millet (Panicum miliaceum L.) is an orphan crop with the potential to improve
cereal production and quality, and ensure food security. Here we present the genetic …

Asymmetric gene expression and cell-type-specific regulatory networks in the root of bread wheat revealed by single-cell multiomics analysis

L Zhang, C He, Y Lai, Y Wang, L Kang, A Liu, C Lan… - Genome biology, 2023 - Springer
Background Homoeologs are defined as homologous genes resulting from allopolyploidy.
Bread wheat, Triticum aestivum, is an allohexaploid species with many homoeologs …

Transposable elements orchestrate subgenome-convergent and-divergent transcription in common wheat

Y Zhang, Z Li, J Liu, Y Zhang, L Ye, Y Peng… - Nature …, 2022 - nature.com
The success of common wheat as a global staple crop was largely attributed to its genomic
diversity and redundancy due to the merge of different genomes, giving rise to the major …

The 3D architecture of the pepper genome and its relationship to function and evolution

Y Liao, J Wang, Z Zhu, Y Liu, J Chen, Y Zhou… - Nature …, 2022 - nature.com
The organization of chromatin into self-interacting domains is universal among eukaryotic
genomes, though how and why they form varies considerably. Here we report a …

Myb10‐D confers PHS‐3D resistance to pre‐harvest sprouting by regulating NCED in ABA biosynthesis pathway of wheat

J Lang, Y Fu, Y Zhou, M Cheng, M Deng, M Li… - New …, 2021 - Wiley Online Library
Summary Pre‐harvest sprouting (PHS), the germination of grain before harvest, is a serious
problem resulting in wheat yield and quality losses. Here, we mapped the PHS resistance …

3D organization of regulatory elements for transcriptional regulation in Arabidopsis

L Deng, Q Zhou, J Zhou, Q Zhang, Z Jia, G Zhu… - Genome Biology, 2023 - Springer
Background Although spatial organization of compartments and topologically associating
domains at large scale is relatively well studied, the spatial organization of regulatory …

Evolutionary rewiring of the wheat transcriptional regulatory network by lineage-specific transposable elements

Y Zhang, Z Li, K Lin, Y Peng, L Ye, Y Zhuang… - Genome …, 2021 - genome.cshlp.org
More than 80% of the wheat genome consists of transposable elements (TEs), which act as
major drivers of wheat genome evolution. However, their contributions to the regulatory …

A platform for whole-genome speed introgression from Aegilops tauschii to wheat for breeding future crops

H Li, L Zhu, R Fan, Z Li, Y Liu, A Shaheen, F Nie, C Li… - Nature …, 2024 - nature.com
Breeding new and sustainable crop cultivars of high yields and desirable traits has been a
major challenge for ensuring food security for the growing global human population. For …