[HTML][HTML] Guidelines for validation of next-generation sequencing–based oncology panels: a joint consensus recommendation of the Association for Molecular …

LJ Jennings, ME Arcila, C Corless… - The Journal of molecular …, 2017 - Elsevier
Next-generation sequencing (NGS) methods for cancer testing have been rapidly adopted
by clinical laboratories. To establish analytical validation best practice guidelines for NGS …

[HTML][HTML] Standardization and quality management in next-generation sequencing

C Endrullat, J Glökler, P Franke, M Frohme - Applied & translational …, 2016 - Elsevier
DNA sequencing continues to evolve quickly even after> 30 years. Many new platforms
suddenly appeared and former established systems have vanished in almost the same …

The Oxford Nanopore MinION: delivery of nanopore sequencing to the genomics community

M Jain, HE Olsen, B Paten, M Akeson - Genome biology, 2016 - Springer
Nanopore DNA strand sequencing has emerged as a competitive, portable technology.
Reads exceeding 150 kilobases have been achieved, as have in-field detection and …

The feasibility study of non-invasive fetal trisomy 18 and 21 detection with semiconductor sequencing platform

YJ Jeon, Y Zhou, Y Li, Q Guo, J Chen, S Quan… - PloS one, 2014 - journals.plos.org
Objective Recent non-invasive prenatal testing (NIPT) technologies are based on next-
generation sequencing (NGS). NGS allows rapid and effective clinical diagnoses to be …

Validation of next-generation sequencing for comprehensive chromosome screening of embryos

A Kung, S Munné, B Bankowski, A Coates… - Reproductive biomedicine …, 2015 - Elsevier
Massively parallel genome sequencing, also known as next-generation sequencing (NGS),
is the latest approach for preimplantation genetic diagnosis. The purpose of this study was to …

A comparison of Illumina and Ion Torrent sequencing platforms in the context of differential gene expression

NF Lahens, E Ricciotti, O Smirnova, E Toorens, EJ Kim… - BMC genomics, 2017 - Springer
Abstract Background Though Illumina has largely dominated the RNA-Seq field, the
simultaneous availability of Ion Torrent has left scientists wondering which platform is most …

Evaluation of potential candidate genes involved in salinity tolerance in striped catfish (Pangasianodon hypophthalmus) using an RNA-Seq approach

TV Nguyen, H Jung, TM Nguyen, D Hurwood, P Mather - Marine Genomics, 2016 - Elsevier
Increasing salinity levels in freshwater and coastal environments caused by sea level rise
linked to climate change is now recognized to be a major factor that can impact fish growth …

[HTML][HTML] Comparison of next-generation sequencing panels and platforms for detection and verification of somatic tumor variants for clinical diagnostics

M Misyura, T Zhang, MA Sukhai, M Thomas… - The Journal of Molecular …, 2016 - Elsevier
Use of next-generation sequencing to detect somatic variants in DNA extracted from formalin-
fixed, paraffin-embedded tumor tissues poses a challenge for clinical molecular diagnostic …

Rapid multiplex small DNA sequencing on the MinION nanopore sequencing platform

S Wei, ZR Weiss, Z Williams - G3: Genes, Genomes, Genetics, 2018 - academic.oup.com
Real-time sequencing of short DNA reads has a wide variety of clinical and research
applications including screening for mutations, target sequences and aneuploidy. We …

Rapid short-read sequencing and aneuploidy detection using MinION nanopore technology

S Wei, Z Williams - Genetics, 2016 - academic.oup.com
MinION is a memory stick–sized nanopore-based sequencer designed primarily for single-
molecule sequencing of long DNA fragments (> 6 kb). We developed a library preparation …