Nuclear phylotranscriptomics and phylogenomics support numerous polyploidization events and hypotheses for the evolution of rhizobial nitrogen-fixing symbiosis in …

Y Zhao, R Zhang, KW Jiang, J Qi, Y Hu, J Guo, R Zhu… - Molecular plant, 2021 - cell.com
Fabaceae are the third largest angiosperm family, with 765 genera and∼ 19 500 species.
They are important both economically and ecologically, and global Fabaceae crops are …

[HTML][HTML]  Disintegration of the genus Prosopis L.(Leguminosae, Caesalpinioideae, mimosoid clade)

CE Hughes, JJ Ringelberg, GP Lewis, SA Catalano - PhytoKeys, 2022 - ncbi.nlm.nih.gov
 Abstract Robust evidence from phylogenomic analyses of 997 nuclear genes has recently
shown, beyond doubt, that the genus Prosopis is polyphyletic with three separate lineages …

Nuclear phylogenomics of angiosperms and insights into their relationships and evolution

G Zhang, H Ma - Journal of Integrative Plant Biology, 2024 - Wiley Online Library
Angiosperms (flowering plants) are by far the most diverse land plant group with over
300,000 species. The sudden appearance of diverse angiosperms in the fossil record was …

[HTML][HTML]  Phylogenomic analysis of 997 nuclear genes reveals the need for extensive generic re-delimitation in Caesalpinioideae (Leguminosae)

JJ Ringelberg, EJM Koenen, JR Iganci, LP de Queiroz… - PhytoKeys, 2022 - ncbi.nlm.nih.gov
 Abstract Subfamily Caesalpinioideae with ca. 4,600 species in 152 genera is the second-
largest subfamily of legumes (Leguminosae) and forms an ecologically and economically …

Precipitation is the main axis of tropical plant phylogenetic turnover across space and time

JJ Ringelberg, EJM Koenen, B Sauter, A Aebli… - Science …, 2023 - science.org
Early natural historians—Comte de Buffon, von Humboldt, and De Candolle—established
environment and geography as two principal axes determining the distribution of groups of …

Highly resolved papilionoid legume phylogeny based on plastid phylogenomics

IS Choi, D Cardoso, LP De Queiroz… - Frontiers in Plant …, 2022 - frontiersin.org
Comprising 501 genera and around 14,000 species, Papilionoideae is not only the largest
subfamily of Fabaceae (Leguminosae; legumes), but also one of the most extraordinarily …

The innovation of the symbiosome has enhanced the evolutionary stability of nitrogen fixation in legumes

SM de Faria, JJ Ringelberg, E Gross… - New …, 2022 - Wiley Online Library
Nitrogen‐fixing symbiosis is globally important in ecosystem functioning and agriculture, yet
the evolutionary history of nodulation remains the focus of considerable debate. Recent …

Target capture and genome skimming for plant diversity studies

FF Pezzini, G Ferrari, LL Forrest, ML Hart… - Applications in Plant …, 2023 - Wiley Online Library
Recent technological advances in long‐read high‐throughput sequencing and assembly
methods have facilitated the generation of annotated chromosome‐scale whole‐genome …

[HTML][HTML]  Advances in Legume Systematics 14. Classification of Caesalpinioideae. Part 2: Higher-level classification

A Bruneau, LP de Queiroz, JJ Ringelberg… - …, 2024 - pmc.ncbi.nlm.nih.gov
 Abstract Caesalpinioideae is the second largest subfamily of legumes (Leguminosae) with
ca. 4680 species and 163 genera. It is an ecologically and economically important group …

Phylogenomics insights into gene evolution, rapid species diversification, and morphological innovation of the apple tribe (Maleae, Rosaceae)

L Zhang, DF Morales‐Briones, Y Li, G Zhang… - New …, 2023 - Wiley Online Library
Maleae is one of the most widespread tribes of Rosaceae and includes several important
fruit crops and ornamental plants. We used nuclear genes from 62 transcriptomes/genomes …