Classification, ontology, and precision medicine

MA Haendel, CG Chute… - New England Journal of …, 2018 - Mass Medical Soc
Ontologies, Phenotypes, and Big Data Data-organizing methods have been in place for
centuries, but very large data sets have come into being relatively recently. The authors …

The RASopathies: from pathogenetics to therapeutics

KE Hebron, ER Hernandez… - Disease models & …, 2022 - journals.biologists.com
The RASopathies are a group of disorders caused by a germline mutation in one of the
genes encoding a component of the RAS/MAPK pathway. These disorders, including …

The International Mouse Phenotyping Consortium: comprehensive knockout phenotyping underpinning the study of human disease

T Groza, FL Gomez, HH Mashhadi… - Nucleic acids …, 2023 - academic.oup.com
Abstract The International Mouse Phenotyping Consortium (IMPC; https://www.
mousephenotype. org/) web portal makes available curated, integrated and analysed …

Expansion of the Human Phenotype Ontology (HPO) knowledge base and resources

S Köhler, L Carmody, N Vasilevsky… - Nucleic acids …, 2019 - academic.oup.com
Abstract The Human Phenotype Ontology (HPO)—a standardized vocabulary of phenotypic
abnormalities associated with 7000+ diseases—is used by thousands of researchers …

The single-cell transcriptional landscape of mammalian organogenesis

J Cao, M Spielmann, X Qiu, X Huang, DM Ibrahim… - Nature, 2019 - nature.com
Mammalian organogenesis is a remarkable process. Within a short timeframe, the cells of
the three germ layers transform into an embryo that includes most of the major internal and …

Spatiotemporal transcriptomic maps of whole mouse embryos at the onset of organogenesis

A Sampath Kumar, L Tian, A Bolondi, AA Hernández… - Nature Genetics, 2023 - nature.com
Spatiotemporal orchestration of gene expression is required for proper embryonic
development. The use of single-cell technologies has begun to provide improved resolution …

[HTML][HTML] Animal models to study bile acid metabolism

J Li, PA Dawson - Biochimica et Biophysica Acta (BBA)-Molecular Basis …, 2019 - Elsevier
The use of animal models, particularly genetically modified mice, continues to play a critical
role in studying the relationship between bile acid metabolism and human liver disease …

Identifying genes whose mutant transcripts cause dominant disease traits by potential gain-of-function alleles

Z Coban-Akdemir, JJ White, X Song… - The American Journal of …, 2018 - cell.com
Premature termination codon (PTC)-bearing transcripts are often degraded by nonsense-
mediated decay (NMD) resulting in loss-of-function (LoF) alleles. However, not all PTCs …

Revisiting the role of dihydroorotate dehydrogenase as a therapeutic target for cancer

JT Madak, A Bankhead III, CR Cuthbertson… - Pharmacology & …, 2019 - Elsevier
Identified as a hallmark of cancer, metabolic reprogramming allows cancer cells to rapidly
proliferate, resist chemotherapies, invade, metastasize, and survive a nutrient-deprived …

[HTML][HTML] The molecular basis of MeCP2 function in the brain

R Tillotson, A Bird - Journal of molecular biology, 2020 - Elsevier
MeCP2 is a reader of the DNA methylome that occupies a large proportion of the genome
due to its high abundance and the frequency of its target sites. It has been the subject of …