Methods and advances in metabolic flux analysis: a mini-review

MR Antoniewicz - Journal of Industrial Microbiology and …, 2015 - academic.oup.com
Metabolic flux analysis (MFA) is one of the pillars of metabolic engineering. Over the past
three decades, it has been widely used to quantify intracellular metabolic fluxes in both …

Progress in monitoring, modeling and control of bioprocesses during the last 20 years

K Schügerl - Journal of biotechnology, 2001 - Elsevier
The paper gives a review on the recent development of bioprocess engineering. It includes
monitoring of product formation processes by flow injection analysis, various types of …

The oxidative pentose phosphate pathway is the primary source of NADPH for lipid overproduction from glucose in Yarrowia lipolytica

TM Wasylenko, WS Ahn, G Stephanopoulos - Metabolic engineering, 2015 - Elsevier
Oleaginous microbes represent an attractive means of converting a diverse range of
feedstocks into oils that can be transesterified to biodiesel. However, the mechanism of lipid …

The soluble and membrane-bound transhydrogenases UdhA and PntAB have divergent functions in NADPH metabolism of Escherichia coli

U Sauer, F Canonaco, S Heri, A Perrenoud… - Journal of Biological …, 2004 - ASBMB
Pentose phosphate pathway and isocitrate dehydrogenase are generally considered to be
the major sources of the anabolic reductant NADPH. As one of very few microbes …

Determination of confidence intervals of metabolic fluxes estimated from stable isotope measurements

MR Antoniewicz, JK Kelleher, G Stephanopoulos - Metabolic engineering, 2006 - Elsevier
Metabolic fluxes, estimated from stable isotope studies, provide a key to quantifying
physiology in fields ranging from metabolic engineering to the analysis of human metabolic …

A universal framework for 13C metabolic flux analysis

W Wiechert, M Möllney, S Petersen, AA De Graaf - Metabolic engineering, 2001 - Elsevier
A general methodology is presented for the modeling, simulation, design, evaluation, and
statistical analysis of 13C-labeling experiments for metabolic flux analysis. The universal …

Metabolic flux analysis and metabolic engineering of microorganisms

HU Kim, TY Kim, SY Lee - Molecular BioSystems, 2008 - pubs.rsc.org
Recent advances in metabolic flux analysis including genome-scale constraints-based flux
analysis and its applications in metabolic engineering are reviewed. Various computational …

Metabolic flux analysis using mass spectrometry

C Wittmann - Tools and Applications of Biochemical Engineering …, 2002 - Springer
Detailed knowledge on carbon flux distributions is crucial for the understanding and targeted
optimization of cellular systems. Analytical methods to identify the topology of metabolic …

Advances in analysis of microbial metabolic fluxes via 13C isotopic labeling

YJ Tang, HG Martin, S Myers… - Mass spectrometry …, 2009 - Wiley Online Library
Metabolic flux analysis via 13C labeling (13C MFA) quantitatively tracks metabolic pathway
activity and determines overall enzymatic function in cells. Three core techniques are …

13C Metabolic Flux Analysis of acetate conversion to lipids by Yarrowia lipolytica

N Liu, K Qiao, G Stephanopoulos - Metabolic engineering, 2016 - Elsevier
Volatile fatty acids (VFAs) are an inexpensive and renewable carbon source that can be
generated from gas fermentation and anaerobic digestion of fermentable wastes. The …