Kinetic and catalytic mechanisms of protein kinases

JA Adams - Chemical reviews, 2001 - ACS Publications
The reversible phosphorylation of proteins ranks among the most important posttranslational
modifications that occur in the cell. In the last several decades, protein phosphorylation has …

[HTML][HTML] A century of enzyme kinetic analysis, 1913 to 2013

KA Johnson - FEBS letters, 2013 - Elsevier
This review traces the history and logical progression of methods for quantitative analysis of
enzyme kinetics from the 1913 Michaelis and Menten paper to the application of modern …

The original Michaelis constant: translation of the 1913 Michaelis–Menten paper

KA Johnson, RS Goody - Biochemistry, 2011 - ACS Publications
Nearly 100 years ago Michaelis and Menten published their now classic paper [Michaelis,
L., and Menten, ML (1913) Die Kinetik der Invertinwirkung. Biochem. Z. 49, 333–369] in …

The interaction of Arp2/3 complex with actin: nucleation, high affinity pointed end capping, and formation of branching networks of filaments

RD Mullins, JA Heuser… - Proceedings of the …, 1998 - National Acad Sciences
The Arp2/3 complex is a stable assembly of seven protein subunits including two actin-
related proteins (Arp2 and Arp3) and five novel proteins. Previous work showed that this …

pH-induced mechanistic changeover from hydroxyl radicals to iron (IV) in the Fenton reaction

H Bataineh, O Pestovsky, A Bakac - Chemical Science, 2012 - pubs.rsc.org
A major pathway in the reaction between Fe (II) and H2O2 at pH 6–7 in non-coordinating
buffers exhibits inverse kinetic dependence on [H+] and leads to oxidation of dimethyl …

Global kinetic explorer: a new computer program for dynamic simulation and fitting of kinetic data

KA Johnson, ZB Simpson, T Blom - Analytical biochemistry, 2009 - Elsevier
We describe a new dynamic kinetic simulation program that allows multiple data sets to be fit
simultaneously to a single model based on numerical integration of the rate equations …

E-CELL: software environment for whole-cell simulation.

M Tomita, K Hashimoto, K Takahashi… - Bioinformatics …, 1999 - academic.oup.com
MOTIVATION: Genome sequencing projects and further systematic functional analyses of
complete gene sets are producing an unprecedented mass of molecular information for a …

Nucleation–elongation: a mechanism for cooperative supramolecular polymerization

D Zhao, JS Moore - Organic & biomolecular chemistry, 2003 - pubs.rsc.org
The kinetic and thermodynamic characteristics of polymerizations following a cooperative,
nucleation–elongation mechanism are discussed in comparison to those of non …

Pre-steady-state kinetic analysis of processive DNA replication including complete characterization of an exonuclease-deficient mutant

SS Patel, I Wong, KA Johnson - Biochemistry, 1991 - ACS Publications
E'-Dn+ r* ED n+ r**-s [Pl ED n+ 1 where E, D, N, and P represent T7 DNA polymerase, DNA
primer/template, deoxynucleoside triphosphate, and inorganic pyrophosphate, respectively …

Construction and evaluation of the kinetic scheme associated with dihydrofolate reductase from Escherichia coli

CA Fierke, KA Johnson, SJ Benkovic - Biochemistry, 1987 - ACS Publications
Department of Chemistry, The Pennsylvania State University, University Park, Pennsylvania
16802 Received September 19, 1986; Revised Manuscript Received January 29, 1987 …