G-quadruplexes and helicases

O Mendoza, A Bourdoncle, JB Boulé… - Nucleic acids …, 2016 - academic.oup.com
Guanine-rich DNA strands can fold in vitro into non-canonical DNA structures called G-
quadruplexes. These structures may be very stable under physiological conditions …

G‐quadruplex nucleic acids and human disease

Y Wu, RM Brosh Jr - The FEBS journal, 2010 - Wiley Online Library
Alternate DNA structures that deviate from B‐form double‐stranded DNA such as G‐
quadruplex (G4) DNA can be formed by sequences that are widely distributed throughout …

The yeast Pif1 helicase prevents genomic instability caused by G-quadruplex-forming CEB1 sequences in vivo

C Ribeyre, J Lopes, JB Boulé, A Piazza, A Guédin… - PLoS …, 2009 - journals.plos.org
In budding yeast, the Pif1 DNA helicase is involved in the maintenance of both nuclear and
mitochondrial genomes, but its role in these processes is still poorly understood. Here, we …

Unwinding the functions of the Pif1 family helicases

ML Bochman, N Sabouri, VA Zakian - DNA repair, 2010 - Elsevier
Helicases are ubiquitous enzymes found in all organisms that are necessary for all (or
virtually all) aspects of nucleic acid metabolism. The Pif1 helicase family is a group of 5′→ …

A hybrid G-quadruplex structure formed between RNA and DNA explains the extraordinary stability of the mitochondrial R-loop

PH Wanrooij, JP Uhler, Y Shi, F Westerlund… - Nucleic acids …, 2012 - academic.oup.com
In human mitochondria the transcription machinery generates the RNA primers needed for
initiation of DNA replication. A critical feature of the leading-strand origin of mitochondrial …

The yeast Pif1p DNA helicase preferentially unwinds RNA–DNA substrates

JB Boule, VA Zakian - Nucleic acids research, 2007 - academic.oup.com
Pif1p is the prototypical member of the PIF1 family of DNA helicases, a subfamily of SFI
helicases conserved from yeast to humans. Baker's yeast Pif1p is involved in the …

Mutational landscape of yeast mutator strains

A Serero, C Jubin, S Loeillet… - Proceedings of the …, 2014 - National Acad Sciences
The acquisition of mutations is relevant to every aspect of genetics, including cancer and
evolution of species on Darwinian selection. Genome variations arise from rare stochastic …

Creation and resolution of non-B-DNA structural impediments during replication

C Mellor, C Perez, JE Sale - Critical reviews in biochemistry and …, 2022 - Taylor & Francis
During replication, folding of the DNA template into non-B-form secondary structures
provides one of the most abundant impediments to the smooth progression of the replisome …

[HTML][HTML] Mitochondria–nucleus network for genome stability

A Kaniak-Golik, A Skoneczna - Free Radical Biology and Medicine, 2015 - Elsevier
The proper functioning of the cell depends on preserving the cellular genome. In yeast cells,
a limited number of genes are located on mitochondrial DNA. Although the mechanisms …

Evolutionary tinkering with mitochondrial nucleoids

M Kucej, RA Butow - Trends in cell biology, 2007 - cell.com
Mitochondrial DNA (mtDNA) is organized in nucleoprotein particles called nucleoids. Each
nucleoid, which is considered a heritable unit of mtDNA, might contain several copies of the …