Assessment of GO-based protein interaction affinities in the large-scale human–coronavirus family interactome

SS Bandyopadhyay, AK Halder, S Saha, P Chatterjee… - Vaccines, 2023 - mdpi.com
SARS-CoV-2 is a novel coronavirus that replicates itself via interacting with the host
proteins. As a result, identifying virus and host protein-protein interactions could help …

JUPPI: A Multi-Level Feature Based Method for PPI Prediction and a Refined Strategy for Performance Assessment

AK Halder, SS Bandyopadhyay… - IEEE/ACM …, 2020 - ieeexplore.ieee.org
Over the years, several methods have been proposed for the computational PPI prediction
with different performance evaluation strategies. While attempting to benchmark …

Analysis of Large-Scale Human Protein Sequences Using an Efficient Spark-Based DBSCAN Algorithm

S Sekhar Bandyopadhyay, A Kumar Halder… - … Conference on Frontiers …, 2020 - Springer
The development of modern high throughput sequencing techniques has resulted in an
exponential growth in meta-genomic sequence accumulation that could greatly enhance …