The evolution and evolvability of photosystem II

T Oliver, TD Kim, JP Trinugroho… - Annual Review of …, 2023 - annualreviews.org
Photosystem II is the water-oxidizing and O2-evolving enzyme of photosynthesis. How and
when this remarkable enzyme arose are fundamental questions in the history of life that …

Global biogeochemical impacts of phytoplankton: a trait‐based perspective

E Litchman, P de Tezanos Pinto, KF Edwards… - Journal of …, 2015 - Wiley Online Library
Phytoplankton are key players in the global carbon cycle, contributing about half of global
primary productivity. Within the phytoplankton, functional groups (characterized by distinct …

A global ocean atlas of eukaryotic genes

Q Carradec, E Pelletier, C Da Silva, A Alberti… - Nature …, 2018 - nature.com
While our knowledge about the roles of microbes and viruses in the ocean has increased
tremendously due to recent advances in genomics and metagenomics, research on marine …

Genomes of coral dinoflagellate symbionts highlight evolutionary adaptations conducive to a symbiotic lifestyle

M Aranda, Y Li, YJ Liew, S Baumgarten, O Simakov… - Scientific reports, 2016 - nature.com
Despite half a century of research, the biology of dinoflagellates remains enigmatic: they
defy many functional and genetic traits attributed to typical eukaryotic cells. Genomic …

Draft assembly of the Symbiodinium minutum nuclear genome reveals dinoflagellate gene structure

E Shoguchi, C Shinzato, T Kawashima, F Gyoja… - Current biology, 2013 - cell.com
Background Dinoflagellates are known for their capacity to form harmful blooms (eg," red
tides") and as symbiotic, photosynthetic partners for corals. These unicellular eukaryotes …

Untangling the early diversification of eukaryotes: a phylogenomic study of the evolutionary origins of Centrohelida, Haptophyta and Cryptista

F Burki, M Kaplan, DV Tikhonenkov… - … of the Royal …, 2016 - royalsocietypublishing.org
Assembling the global eukaryotic tree of life has long been a major effort of Biology. In
recent years, pushed by the new availability of genome-scale data for microbial eukaryotes …

Comparison of 15 dinoflagellate genomes reveals extensive sequence and structural divergence in family Symbiodiniaceae and genus Symbiodinium

RA González-Pech, TG Stephens, Y Chen… - BMC biology, 2021 - Springer
Background Dinoflagellates in the family Symbiodiniaceae are important photosynthetic
symbionts in cnidarians (such as corals) and other coral reef organisms. Breakdown of the …

Estimation of 18S gene copy number in marine eukaryotic plankton using a next-generation sequencing approach

W Gong, A Marchetti - Frontiers in marine Science, 2019 - frontiersin.org
The small subunit 18S rRNA (18S) gene is the most commonly used marker for taxonomic
identification in eukaryotes. However, protists may harbor substantial variation in their 18S …

Genetic and spatial organization of the unusual chromosomes of the dinoflagellate Symbiodinium microadriaticum

A Nand, Y Zhan, OR Salazar, M Aranda, CR Voolstra… - Nature Genetics, 2021 - nature.com
Dinoflagellates are main primary producers in the oceans, the cause of algal blooms and
endosymbionts of marine invertebrates. Much remains to be understood about their biology …

Evolution of DNA methylome diversity in eukaryotes

A de Mendoza, R Lister, O Bogdanovic - Journal of Molecular Biology, 2020 - Elsevier
Cytosine DNA methylation (5mC) is a widespread base modification in eukaryotic genomes
with critical roles in transcriptional regulation. In recent years, our understanding of 5mC has …