Tracking the 2022 monkeypox outbreak with epidemiological data in real-time

MUG Kraemer, H Tegally, DM Pigott… - The Lancet Infectious …, 2022 - thelancet.com
Monkeypox virus was first documented in humans in the 1970s and outbreaks have been
reported in many countries, with most cases restricted to endemic areas. 1 In early May …

Epidemic history and evolution of an emerging threat of international concern, the severe acute respiratory syndrome coronavirus 2

M Giovanetti, F Branda, E Cella… - Journal of Medical …, 2023 - Wiley Online Library
This comprehensive review focuses on the severe acute respiratory syndrome coronavirus 2
(SARS‐CoV‐2) and its impact as the cause of the COVID‐19 pandemic. Its objective is to …

Estimating epidemiologic dynamics from cross-sectional viral load distributions

JA Hay, L Kennedy-Shaffer, S Kanjilal, NJ Lennon… - Science, 2021 - science.org
Estimating an epidemic's trajectory is crucial for developing public health responses to
infectious diseases, but case data used for such estimation are confounded by variable …

Lessons from COVID-19 for rescalable data collection

S Bhatia, N Imai, OJ Watson, A Abbood… - The Lancet Infectious …, 2023 - thelancet.com
Novel data and analyses have had an important role in informing the public health response
to the COVID-19 pandemic. Existing surveillance systems were scaled up, and in some …

Global monitoring of the impact of the COVID-19 pandemic through online surveys sampled from the Facebook user base

CM Astley, G Tuli, KA Mc Cord… - Proceedings of the …, 2021 - National Acad Sciences
Simultaneously tracking the global impact of COVID-19 is challenging because of regional
variation in resources and reporting. Leveraging self-reported survey outcomes via an …

Improving prediction of COVID-19 evolution by fusing epidemiological and mobility data

S García-Cremades, J Morales-García… - Scientific Reports, 2021 - nature.com
We are witnessing the dramatic consequences of the COVID-19 pandemic which,
unfortunately, go beyond the impact on the health system. Until herd immunity is achieved …

Emergence and widespread circulation of a recombinant SARS-CoV-2 lineage in North America

B Gutierrez, HGC Sánchez, D da Silva Candido… - Cell Host & Microbe, 2022 - cell.com
Although recombination is a feature of coronavirus evolution, previously detected
recombinant lineages of SARS-CoV-2 have shown limited circulation thus far. Here, we …

A worldwide epidemiological database for COVID-19 at fine-grained spatial resolution

E Guidotti - Scientific Data, 2022 - nature.com
This database provides the daily time-series of COVID-19 cases, deaths, recovered people,
tests, vaccinations, and hospitalizations, for more than 230 countries, 760 regions, and …

Collaborative methods to enhance reproducibility and accelerate discovery

DA Leins, SB Haase, M Eslami, J Schrier… - Digital …, 2023 - pubs.rsc.org
Many domains across physical, life, and social sciences suffer from incomplete models of
constructs (eg, organisms, environments, behaviors), which hinders reproducibility and the …

Openstreetmap contribution to local data ecosystems in COVID-19 times: Experiences and reflections from the Italian case

M Minghini, A Sarretta, M Napolitano - Data, 2022 - mdpi.com
Data and digital technologies have been at the core of the societal response to COVID-19
since the beginning of the pandemic. This work focuses on the specific contribution of the …