Reaction-rate theory: fifty years after Kramers

P Hänggi, P Talkner, M Borkovec - Reviews of modern physics, 1990 - APS
The calculation of rate coefficients is a discipline of nonlinear science of importance to much
of physics, chemistry, engineering, and biology. Fifty years after Kramers' seminal paper on …

Brownian motors: noisy transport far from equilibrium

P Reimann - Physics reports, 2002 - Elsevier
Transport phenomena in spatially periodic systems far from thermal equilibrium are
considered. The main emphasis is put on directed transport in so-called Brownian motors …

Quantum‐classical path integral evaluation of reaction rates with a near‐equilibrium flux formulation

A Bose, N Makri - International Journal of Quantum Chemistry, 2021 - Wiley Online Library
Quantum‐classical formulations of reactive flux correlation functions require the partial Weyl–
Wigner transform of the thermalized flux operator, whose numerical evaluation is unstable …

A perspective on enzyme catalysis

SJ Benkovic, S Hammes-Schiffer - Science, 2003 - science.org
The seminal hypotheses proposed over the years for enzymatic catalysis are scrutinized.
The historical record is explored from both biochemical and theoretical perspectives …

[HTML][HTML] How lipids affect the activities of integral membrane proteins

AG Lee - Biochimica et Biophysica Acta (BBA)-Biomembranes, 2004 - Elsevier
The activities of integral membrane proteins are often affected by the structures of the lipid
molecules that surround them in the membrane. One important parameter is the …

Femtosecond solvation dynamics of water

R Jimenez, GR Fleming, PV Kumar, M Maroncelli - Nature, 1994 - nature.com
THE timescale of the response of solvent molecules to electronic rearrangement of solute
molecules has a critical influence on the rates of chemical reactions in liquids1–10. In …

Recognition dynamics up to microseconds revealed from an RDC-derived ubiquitin ensemble in solution

OF Lange, NA Lakomek, C Fares, GF Schroder… - science, 2008 - science.org
Protein dynamics are essential for protein function, and yet it has been challenging to
access the underlying atomic motions in solution on nanosecond-to-microsecond time …

Effect of friction on electron transfer in biomolecules

A Garg, JN Onuchic, V Ambegaokar - The Journal of chemical physics, 1985 - pubs.aip.org
In biological and chemical electron transfer, a nuclear reaction coordinate is coupled to
other nuclear~ nd/or" solvent" coordinates. This coupling, or friction, if strong enough, may …

Intermediates and barrier crossing in a random energy model (with applications to protein folding)

JD Bryngelson, PG Wolynes - The Journal of Physical Chemistry, 1989 - ACS Publications
We show, by application to a simple protein folding model, how a stochastic Hamiltonian can
be used tostudy a complex chemical reaction. This model is found to have many metastable …

Dynamical effects in electron transfer reactions

H Sumi, RA Marcus - The Journal of chemical physics, 1986 - pubs.aip.org
A theoretical treatment is given for the effect of intramolecular vibrational and diffusive
solvent orientational motions on the rate of electron transfer reactions. Four limiting cases …