The use of next generation sequencing for improving food safety: Translation into practice

B Jagadeesan, P Gerner-Smidt, MW Allard, S Leuillet… - Food …, 2019 - Elsevier
Abstract Next Generation Sequencing (NGS) combined with powerful bioinformatic
approaches are revolutionising food microbiology. Whole genome sequencing (WGS) of …

Use of whole-genome sequencing for food safety and public health in the United States

E Brown, U Dessai, S McGarry… - … pathogens and disease, 2019 - liebertpub.com
Whole-genome sequencing (WGS) is increasingly used by food regulatory and public health
agencies in the United States to facilitate the detection, investigation, and control of …

Outbreak of Listeria monocytogenes in South Africa, 2017–2018: Laboratory Activities and Experiences Associated with Whole-Genome Sequencing Analysis of …

AM Smith, NP Tau, SL Smouse, M Allam… - Foodborne …, 2019 - liebertpub.com
Abstract In South Africa, a progressive increase in listeriosis cases was noted from mid-June
2017, heralding what was to become the world's largest listeriosis outbreak. A total of 1060 …

Interpreting whole-genome sequence analyses of foodborne bacteria for regulatory applications and outbreak investigations

AW Pightling, JB Pettengill, Y Luo, JD Baugher… - Frontiers in …, 2018 - frontiersin.org
Whole-genome sequence (WGS) analysis has revolutionized the food safety industry by
enabling high-resolution typing of foodborne bacteria. Higher resolving power allows …

Precision identification of diverse bloodstream pathogens in the gut microbiome

FB Tamburini, TM Andermann, E Tkachenko… - Nature medicine, 2018 - nature.com
A comprehensive evaluation of every patient with a bloodstream infection includes an
attempt to identify the infectious source. Pathogens can originate from various places, such …

LiSEQ – whole-genome sequencing of a cross-sectional survey of Listeria monocytogenes in ready-to-eat foods and human clinical cases in Europe

A Painset, JT Björkman, K Kiil, L Guillier… - Microbial …, 2019 - microbiologyresearch.org
We present the LiSEQ (Listeria SEQuencing) project, funded by the European Food Safety
Agency (EFSA) to compare Listeria monocytogenes isolates collected in the European …

Listeria monocytogenes in foods

K Jordan, O McAuliffe - Advances in food and nutrition research, 2018 - Elsevier
Listeria monocytogenes causes listeriosis, a rare foodborne disease with a mortality rate of
20%–30%. The elderly and immunocompromised are particularly susceptible to listeriosis …

Assessment and Comparison of Molecular Subtyping and Characterization Methods for Salmonella

S Tang, RH Orsi, H Luo, C Ge, G Zhang… - Frontiers in …, 2019 - frontiersin.org
The food industry is facing a major transition regarding methods for confirmation,
characterization, and subtyping of Salmonella. Whole-genome sequencing (WGS) is rapidly …

10-Year Molecular Surveillance of Listeria monocytogenes Using Whole-Genome Sequencing in Shanghai, China, 2009–2019

H Zhang, W Chen, J Wang, B Xu, H Liu… - Frontiers in …, 2020 - frontiersin.org
Listeria monocytogenes is an etiologic agent of listeriosis, and has emerged as an important
foodborne pathogen worldwide. In this study, the molecular characteristics of 155 L …

Listeria monocytogenes: An Inconvenient Hurdle for the Dairy Industry

AC Ribeiro, FA Almeida, MM Medeiros, BR Miranda… - Dairy, 2023 - mdpi.com
Listeria monocytogenes is an opportunistic pathogen that affects specific groups of
individuals, with a high mortality rate. The control of L. monocytogenes in dairy industries …