Multi-omics integration in biomedical research–A metabolomics-centric review

MA Wörheide, J Krumsiek, G Kastenmüller… - Analytica chimica …, 2021 - Elsevier
Recent advances in high-throughput technologies have enabled the profiling of multiple
layers of a biological system, including DNA sequence data (genomics), RNA expression …

The state of the art in multilayer network visualization

F McGee, M Ghoniem, G Melançon… - Computer Graphics …, 2019 - Wiley Online Library
Modelling relationship between entities in real‐world systems with a simple graph is a
standard approach. However, reality is better embraced as several interdependent …

[HTML][HTML] Dataset search: a survey

A Chapman, E Simperl, L Koesten, G Konstantinidis… - The VLDB Journal, 2020 - Springer
Generating value from data requires the ability to find, access and make sense of datasets.
There are many efforts underway to encourage data sharing and reuse, from scientific …

AirVis: Visual analytics of air pollution propagation

Z Deng, D Weng, J Chen, R Liu, Z Wang… - IEEE transactions on …, 2019 - ieeexplore.ieee.org
Air pollution has become a serious public health problem for many cities around the world.
To find the causes of air pollution, the propagation processes of air pollutants must be …

Explaining vulnerabilities to adversarial machine learning through visual analytics

Y Ma, T Xie, J Li, R Maciejewski - IEEE transactions on …, 2019 - ieeexplore.ieee.org
Machine learning models are currently being deployed in a variety of real-world applications
where model predictions are used to make decisions about healthcare, bank loans, and …

[HTML][HTML] Exploring the limits of complexity: A survey of empirical studies on graph visualisation

V Yoghourdjian, D Archambault, S Diehl, T Dwyer… - Visual Informatics, 2018 - Elsevier
For decades, researchers in information visualisation and graph drawing have focused on
developing techniques for the layout and display of very large and complex networks …

The atlas for the aspiring network scientist

M Coscia - arXiv preprint arXiv:2101.00863, 2021 - arxiv.org
Network science is the field dedicated to the investigation and analysis of complex systems
via their representations as networks. We normally model such networks as graphs: sets of …

Comparative evaluation of bipartite, node-link, and matrix-based network representations

M Abdelaal, ND Schiele, K Angerbauer… - … on Visualization and …, 2022 - ieeexplore.ieee.org
This work investigates and compares the performance of node-link diagrams, adjacency
matrices, and bipartite layouts for visualizing networks. In a crowd-sourced user study (), we …

Scalability of network visualisation from a cognitive load perspective

V Yoghourdjian, Y Yang, T Dwyer… - IEEE transactions on …, 2020 - ieeexplore.ieee.org
Node-link diagrams are widely used to visualise networks. However, even the best network
layout algorithms ultimately result in 'hairball'visualisations when the graph reaches a …

[HTML][HTML] Me! Me! Me! Me! A study and comparison of ego network representations

H Ehlers, D Pahr, V Filipov, HY Wu, RG Raidou - Computers & Graphics, 2024 - Elsevier
From social networks to brain connectivity, ego networks are a simple yet powerful approach
to visualizing parts of a larger graph, ie those related to a selected focal node—the so-called …